RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 EIF3CLB5ME19 914 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 KIF20AO95235 890 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 DPEP1P16444 411 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 CLCN6P51797 869 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 CBX1P83916 185 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 HERC4Q5GLZ8 1057 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 NCAPH2Q6IBW4 605 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 POTEGQ6S5H5 508 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 POTEEQ6S8J3 1075 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 SRGAP1Q7Z6B7 1085 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 FAM83AQ86UY5 434 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 KCTD17Q8N5Z5 321 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 GPR161Q8N6U8 529 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 SYT2Q8N9I0 419 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 RABGGTAQ92696 567 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 EIF3CQ99613 913 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 NAPGQ99747 312 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 FGFBP2Q9BYJ0 223 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 RANBP17Q9H2T7 1088 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 NHEJ1Q9H9Q4 299 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 ZNF446Q9NWS9 450 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 FAM53CQ9NYF3 392 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 ZNRF3Q9ULT6 936 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 PLAGL2Q9UPG8 496 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 DNM3Q9UQ16 869 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 COL4A3BPQ9Y5P4 624 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 TRAF5O00463 557 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 MARSP56192 900 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 MAP3K10Q02779 954 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 POTEAQ6S8J7 498 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 ZC3H3Q8IXZ2 948 aaKnown RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 CEP112Q8N8E3 955 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 SCFD1Q8WVM8 642 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 ZBED3Q96IU2 234 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 POLR3CQ9BUI4 534 aaPredicted RBP12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 EDEM3Q9BZQ6 932 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 KCTD10Q9H3F6 313 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 VCPKMTQ9H867 229 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 PGAP2Q9UHJ9 254 aa12.66□□□□□ -0.38
SLC28A1-204ENST00000538177 IGLV3-22A0A075B6J6 115 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 GNA14O95837 355 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 CAP2P40123 477 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 PSMC6P62333 389 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 GIT2Q14161 759 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 ARHGAP27Q6ZUM4 889 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 CYP2W1Q8TAV3 490 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 GOLGA1Q92805 767 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 EMILIN3Q9NT22 766 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 ARGLU1Q9NWB6 273 aaPredicted RBP12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 TBC1D7Q9P0N9 293 aa12.65□□□□□ -0.38
SLC28A1-204ENST00000538177 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 EPHB6O15197 1021 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 KRT18P05783 430 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 ZNF76P36508 570 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 TUBB4BP68371 445 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 FAM160B2Q86V87 743 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 NIM1KQ8IY84 436 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 TMEM39BQ9GZU3 492 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 TRIM10Q9UDY6 481 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 GUCA1BQ9UMX6 200 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 SMCHD1A6NHR9 2005 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 CHMP4BP1P59074 171 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 AMPD2Q01433 879 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 CACNB1Q02641 598 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 PABPC4Q13310 644 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 WHAMMP3Q1A5X7 153 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 TEX35Q5T0J7 233 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 TBC1D5Q92609 795 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 SH2D4AQ9H788 454 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 MMRN2Q9H8L6 949 aa12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 FAM207AQ9NSI2 230 aaPredicted RBP12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 MRPL11Q9Y3B7 192 aaKnown RBP12.64□□□□□ -0.39
SLC28A1-204ENST00000538177 MEIS1O00470 390 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 ZRANB2O95218 330 aaKnown RBP eCLIP12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 IPO7O95373 1038 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 CFBP00751 764 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 KCNMA1Q12791 1236 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 CCDC40Q4G0X9 1142 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 CCDC122Q5T0U0 273 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 TRIM59Q8IWR1 403 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 NELFCDQ8IXH7 590 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 EHBP1Q8NDI1 1231 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 BAP1Q92560 729 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 EIF2AK1Q9BQI3 630 aaKnown RBP12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 FEM1BQ9UK73 627 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 RCCD1A6NED2 376 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 EML1O00423 815 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 KRT86O43790 486 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 EYA4O95677 639 aa12.63□□□□□ -0.39
SLC28A1-204ENST00000538177 CXCL9Q07325 125 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms