RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 NCOA7Q8NI08 942 aa10.32□□□□□ -0.76
SMAD3-203ENST00000537194 CTCFLQ8NI51 663 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-203ENST00000537194 MRPL38Q96DV4 380 aaKnown RBP10.32□□□□□ -0.76
SMAD3-203ENST00000537194 MTMR8Q96EF0 704 aa10.32□□□□□ -0.76
SMAD3-203ENST00000537194 MAD2L2Q9UI95 211 aa10.32□□□□□ -0.76
SMAD3-203ENST00000537194 ARIH1Q9Y4X5 557 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-203ENST00000537194 COL4A4P53420 1690 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-203ENST00000537194 FIBPO43427 364 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 NCK2O43639 380 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 LPXNO60711 386 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 UPP2O95045 317 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 CTSHP09668 335 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 ALADP13716 330 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 GNAQP50148 359 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 GPNMBQ14956 572 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 SEC23AQ15436 765 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 CSPP1Q1MSJ5 1256 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 TRIM71Q2Q1W2 868 aaKnown RBP10.31□□□□□ -0.76
SMAD3-203ENST00000537194 LEXMQ3ZCV2 418 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 PLEKHG4Q58EX7 1191 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 XRRA1Q6P2D8 792 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 CASC1Q6TDU7 716 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 TNPO1Q92973 898 aaKnown RBP10.31□□□□□ -0.76
SMAD3-203ENST00000537194 RRP36Q96EU6 259 aaKnown RBP10.31□□□□□ -0.76
SMAD3-203ENST00000537194 CDHR1Q96JP9 859 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 PIGSQ96S52 555 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 LRFN3Q9BTN0 628 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 IFIH1Q9BYX4 1025 aaKnown RBP10.31□□□□□ -0.76
SMAD3-203ENST00000537194 RIOX1Q9H6W3 641 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 RAPGEFL1Q9UHV5 662 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 RWDD3Q9Y3V2 267 aa10.31□□□□□ -0.76
SMAD3-203ENST00000537194 MUC3AQ02505 3323 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 OPLAHO14841 1288 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 TREHO43280 583 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 RGS20O76081 388 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 RPLP2P05387 115 aaKnown RBP10.3□□□□□ -0.76
SMAD3-203ENST00000537194 ICAM3P32942 547 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 ARHGAP4P98171 946 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 GPM6BQ13491 265 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 EPC2Q52LR7 807 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 UTP14CQ5TAP6 766 aaKnown RBP10.3□□□□□ -0.76
SMAD3-203ENST00000537194 PTCRAQ6ISU1 281 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-203ENST00000537194 TAF2Q6P1X5 1199 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMAD3-203ENST00000537194 CYFIP1Q7L576 1253 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 GJD3Q8N144 294 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 FIBCD1Q8N539 461 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 PIBF1Q8WXW3 757 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 TOP1MTQ969P6 601 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 SENP7Q9BQF6 1050 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 LZTS2Q9BRK4 669 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 C16orf70Q9BSU1 422 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 RNPEPQ9H4A4 650 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 EPHX3Q9H6B9 360 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 EHMT1Q9H9B1 1298 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 NLRC5Q86WI3 1866 aa10.3□□□□□ -0.76
SMAD3-203ENST00000537194 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-203ENST00000537194 SPATA31C2B4DYI2 1134 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 H3BNC9 293 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 M0QZ92 97 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 GPR37L1O60883 481 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 PPP1R11O60927 126 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-203ENST00000537194 HTRA4P83105 476 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-203ENST00000537194 SP2Q02086 613 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 SP4Q02446 784 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 MBTPS1Q14703 1052 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 NFXL1Q6ZNB6 911 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 CYB5R4Q7L1T6 521 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 SPRED2Q7Z698 418 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 TMEM192Q8IY95 271 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 TMTC2Q8N394 836 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 BANK1Q8NDB2 785 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 IL31RAQ8NI17 732 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 PPP2R3CQ969Q6 453 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 IL17RAQ96F46 866 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 INPP4AQ96PE3 977 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-203ENST00000537194 C17orf80Q9BSJ5 609 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 C11orf84Q9BUA3 381 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-203ENST00000537194 NSUN3Q9H649 340 aaKnown RBP10.29□□□□□ -0.76
SMAD3-203ENST00000537194 SETD4Q9NVD3 440 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 RTEL1Q9NZ71 1219 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 DOCK5Q9H7D0 1870 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 NRCAMQ92823 1304 aa10.29□□□□□ -0.76
SMAD3-203ENST00000537194 RALGAPA2Q2PPJ7 1873 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 CCDC69A6NI79 296 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 PI4K2BG5E9Z4 385 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 DDAH1O94760 285 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 IGHDP01880 384 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 RB1P06400 928 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 CTNNB1P35222 781 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 PCNX4Q63HM2 1172 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 FAM178BQ8IXR5 827 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 SP7Q8TDD2 431 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-203ENST00000537194 GLG1Q92896 1179 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 WNT8BQ93098 351 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 ZFP91Q96JP5 570 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-203ENST00000537194 UIMC1Q96RL1 719 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 MAP3K14Q99558 947 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 GPR20Q99678 358 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms