RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 MNS1Q8NEH6 495 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 PURBQ96QR8 312 aaKnown RBP10.33□□□□□ -0.76
UBE3B-207ENST00000537063 EIF3CQ99613 913 aaKnown RBP10.33□□□□□ -0.76
UBE3B-207ENST00000537063 EDEM3Q9BZQ6 932 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 ZNF446Q9NWS9 450 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 POTEFA5A3E0 1075 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 LCA5LO95447 670 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 POTEIP0CG38 1075 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 TAL1P17542 331 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-207ENST00000537063 ARHGAP29Q52LW3 1261 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 FAM83BQ5T0W9 1011 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 POTEGQ6S5H5 508 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 POTEEQ6S8J3 1075 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 PPP4R3CPQ6ZMV5 832 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 SCFD1Q8WVM8 642 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 HAUS4Q9H6D7 363 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 OGFRQ9NZT2 677 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 CDC23Q9UJX2 597 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 PLAGL2Q9UPG8 496 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 CAP2P40123 477 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 FKBP3Q00688 224 aaKnown RBP10.33□□□□□ -0.76
UBE3B-207ENST00000537063 GHRHRQ02643 423 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 LRRC41Q15345 812 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 EDRF1Q3B7T1 1238 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 ZNF569Q5MCW4 686 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 CCDC84Q86UT8 332 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-207ENST00000537063 FAM160B2Q86V87 743 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 SPICE1Q8N0Z3 855 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 SLC35F6Q8N357 371 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 OGFOD1Q8N543 542 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 EEF2KMTQ96G04 330 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 COL4A3BPQ9Y5P4 624 aa10.33□□□□□ -0.76
UBE3B-207ENST00000537063 GNA14O95837 355 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 IKQ13123 557 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-207ENST00000537063 GIT2Q14161 759 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 BMT2Q1RMZ1 405 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 CDAN1Q8IWY9 1227 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 CHURC1Q8WUH1 139 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 UBXN4Q92575 508 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 SLC5A5Q92911 643 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 WDR18Q9BV38 432 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 SH2D4AQ9H788 454 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 DOCK1Q14185 1865 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 NPHP3-ACAD11A0A0J9YXS1 232 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 CTAGE9A4FU28 777 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 EPHB6O15197 1021 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 HOXA13P31271 388 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-207ENST00000537063 KRT83P78385 493 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 PPP2R5CQ13362 524 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 TRIM59Q8IWR1 403 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 BAP1Q92560 729 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 RABGGTAQ92696 567 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 NHEJ1Q9H9Q4 299 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-207ENST00000537063 FEM1BQ9UK73 627 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 ZBTB12Q9Y330 459 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-207ENST00000537063 PES1O00541 588 aaKnown RBP10.32□□□□□ -0.76
UBE3B-207ENST00000537063 PSMD10O75832 226 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 KIF20AO95235 890 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 MUTP22033 750 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 CYLC1P35663 651 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-207ENST00000537063 B3GNT9Q6UX72 402 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 SRGAP1Q7Z6B7 1085 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 GPR161Q8N6U8 529 aaKnown RBP10.32□□□□□ -0.76
UBE3B-207ENST00000537063 NAPGQ99747 312 aaPredicted RBP10.32□□□□□ -0.76
UBE3B-207ENST00000537063 TMEM39BQ9GZU3 492 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 TRAF3IP3Q9Y228 551 aa10.32□□□□□ -0.76
UBE3B-207ENST00000537063 RPTORQ8N122 1335 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 PTGER2P43116 358 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 CLCN6P51797 869 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 PSMC6P62333 389 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
UBE3B-207ENST00000537063 NCAPH2Q6IBW4 605 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 NIM1KQ8IY84 436 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 HSD17B14Q9BPX1 270 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 TUFT1Q9NNX1 390 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 PHF20L1A8MW92 1017 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 ZRANB2O95218 330 aaKnown RBP eCLIP10.31□□□□□ -0.76
UBE3B-207ENST00000537063 EYA4O95677 639 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 KCNMA1Q12791 1236 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 CYP2W1Q8TAV3 490 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 REEP2Q9BRK0 252 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 EMILIN3Q9NT22 766 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 ZNHIT6Q9NWK9 470 aaKnown RBP10.31□□□□□ -0.76
UBE3B-207ENST00000537063 DNM3Q9UQ16 869 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 GCOM1H8Y6P7 765 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-207ENST00000537063 EML1O00423 815 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 POLR2MP0CAP2 368 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 HSD17B4P51659 736 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 ZNF280AP59817 542 aaPredicted RBP10.31□□□□□ -0.76
UBE3B-207ENST00000537063 CXCL9Q07325 125 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 WHAMMP3Q1A5X7 153 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 OTOP1Q7RTM1 612 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 CEP112Q8N8E3 955 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 GOLGA1Q92805 767 aa10.31□□□□□ -0.76
UBE3B-207ENST00000537063 EIF2AK1Q9BQI3 630 aaKnown RBP10.31□□□□□ -0.76
UBE3B-207ENST00000537063 MRPL11Q9Y3B7 192 aaKnown RBP10.31□□□□□ -0.76
UBE3B-207ENST00000537063 WNT10BO00744 389 aa10.3□□□□□ -0.76
UBE3B-207ENST00000537063 HOXD13P35453 343 aa10.3□□□□□ -0.76
UBE3B-207ENST00000537063 TUBB4BP68371 445 aa10.3□□□□□ -0.76
UBE3B-207ENST00000537063 HERC4Q5GLZ8 1057 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms