RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-213ENST00000534532 TRMT2AQ8IZ69 625 aaKnown RBP17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 THEM5Q8N1Q8 247 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 BBOF1Q8ND07 529 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 ACAD9Q9H845 621 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 EMILIN3Q9NT22 766 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 FANCLQ9NW38 375 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 ZNF148Q9UQR1 794 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 WDR64B1ANS9 1081 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 USP17L15C9J2P7 530 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 USP17L13C9JLJ4 530 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 USP17L11C9JVI0 530 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 USP17L18D6R9N7 530 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 USP17L22D6RA61 530 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 USP17L17D6RBQ6 530 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 USP17L19D6RCP7 530 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 USP17L20D6RJB6 530 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 PHKA2P46019 1235 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 COPB1P53618 953 aaKnown RBP17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 USP17L24Q0WX57 530 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 UBN2Q6ZU65 1347 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 CLIC2O15247 247 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 ARL4AP40617 200 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 LRRC41Q15345 812 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 TMEM47Q9BQJ4 181 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 ATP6V0A4Q9HBG4 840 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 PCDHA5Q9Y5H7 936 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 CPDO75976 1380 aa17.11■□□□□ 0.33
NCAPD3-213ENST00000534532 MXI1P50539 228 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 NR5A1Q13285 461 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 CTTNQ14247 550 aaKnown RBP17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 ASB14A6NK59 587 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 CYP2D6P10635 497 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 RPS6KA2Q15349 733 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 MICALL2Q8IY33 904 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 A6NNZ2 444 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 EIF3CLB5ME19 914 aaKnown RBP17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 SLFN14P0C7P3 912 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 TUBB8Q3ZCM7 444 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 ELMOD1Q8N336 334 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 CFAP57Q96MR6 1250 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 EIF3CQ99613 913 aaKnown RBP17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 HAUS4Q9H6D7 363 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 CNOT7Q9UIV1 285 aaKnown RBP17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 STAT3P40763 770 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 RFX6Q8HWS3 928 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 TYW1Q9NV66 732 aaKnown RBP17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 STK25O00506 426 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 NFKBIAP25963 317 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 LMNB2Q03252 620 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 TWF2Q6IBS0 349 aaKnown RBP17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 SLC16A10Q8TF71 515 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 STMN2Q93045 179 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 TTC1Q99614 292 aa17.1■□□□□ 0.33
NCAPD3-213ENST00000534532 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 ARL6IP4Q66PJ3 421 aaKnown RBP17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 PPP4R1Q8TF05 950 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 CDKL2Q92772 493 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 POLIQ9UNA4 740 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 FAM196BA6NMK8 535 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 CIITAP33076 1130 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 MAPK6Q16659 721 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 EFCAB13Q8IY85 973 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 URGCPQ8TCY9 931 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 ADCY10Q96PN6 1610 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 EPHA10Q5JZY3 1008 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 KAZNQ674X7 775 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 TMTC3Q6ZXV5 915 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 MTIF3Q9H2K0 278 aaKnown RBP17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 DCP1AQ9NPI6 582 aaPredicted RBP17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 GOLGA8SH3BPF8 625 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 HEXIM1O94992 359 aaKnown RBP17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 PPP1R18Q6NYC8 613 aa17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 MRPL47Q9HD33 250 aaKnown RBP17.09■□□□□ 0.33
NCAPD3-213ENST00000534532 TRIM28Q13263 835 aaKnown RBP17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 ZNF658Q5TYW1 1059 aaPredicted RBP17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 BHMT2Q9H2M3 363 aa17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 INPP5FQ9Y2H2 1132 aa17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 BUB1O43683 1085 aa17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 TCP1P17987 556 aaKnown RBP17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 VPS41P49754 854 aa17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 OR6B2Q6IFH4 312 aa17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 PPFIBP2Q8ND30 876 aa17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 HEXIM2Q96MH2 286 aaKnown RBP17.08■□□□□ 0.33
NCAPD3-213ENST00000534532 STRIP1Q5VSL9 837 aa17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 ZNF653Q96CK0 615 aa17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 DDX41Q9UJV9 622 aaKnown RBP17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 SPATA31A1Q5TZJ5 1347 aa17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 F5H6K3 240 aa17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 SNAP23O00161 211 aa17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 DDIT3P35638 169 aa17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 GARSP41250 739 aaKnown RBP17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 KLRC3Q07444 240 aa17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 DNAJC24Q6P3W2 148 aa17.08■□□□□ 0.32
NCAPD3-213ENST00000534532 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.08■□□□□ 0.324e-10■■■■■ 86.3
NCAPD3-213ENST00000534532 PEX3P56589 373 aa17.07■□□□□ 0.32
NCAPD3-213ENST00000534532 CCDC62Q6P9F0 684 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms