RNA–Protein interactions for RNA: ENST00000534417.1

TTC17-215, Transcript of tetratricopeptide repeat domain 17, human

TSL 2

Gene TTC17, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC17-215	ENST00000534417	KIAA0825	Q8IV33	1275 aa		11.64	□□□□□ -0.55
TTC17-215	ENST00000534417	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.64	□□□□□ -0.55
TTC17-215	ENST00000534417	TRIM34	Q9BYJ4	488 aa		11.64	□□□□□ -0.55
TTC17-215	ENST00000534417	ZMYND15	Q9H091	742 aa		11.64	□□□□□ -0.55
TTC17-215	ENST00000534417	DBNDD1	Q9H9R9	158 aa		11.64	□□□□□ -0.55
TTC17-215	ENST00000534417	CEP72	Q9P209	647 aa		11.64	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L15	C9J2P7	530 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L13	C9JLJ4	530 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L11	C9JVI0	530 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L18	D6R9N7	530 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L22	D6RA61	530 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L17	D6RBQ6	530 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L19	D6RCP7	530 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L20	D6RJB6	530 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	PES1	O00541	588 aa	Known RBP	11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	OPLAH	O14841	1288 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	ZNF263	O14978	683 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	NKRF	O15226	690 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	MED24	O75448	989 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	SASH3	O75995	380 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	BMP3	P12645	472 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	IDE	P14735	1019 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	MCM3	P25205	808 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	ATP2B2	Q01814	1243 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L24	Q0WX57	530 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	KIF5A	Q12840	1032 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	SLC15A2	Q16348	729 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	LONRF2	Q1L5Z9	754 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	ARSH	Q5FYA8	562 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	USP17L6P	Q6QN14	398 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	KIAA1328	Q86T90	577 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	GPBP1	Q86WP2	473 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	SYT2	Q8N9I0	419 aa	Predicted RBP	11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	TRIM58	Q8NG06	486 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	NEK11	Q8NG66	645 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	CCDC42	Q96M95	316 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	P2RX7	Q99572	595 aa	Known RBP	11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	LACRT	Q9GZZ8	138 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	DEFB129	Q9H1M3	183 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	SH2D4A	Q9H788	454 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	KCNQ5	Q9NR82	932 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	ARHGAP20	Q9P2F6	1191 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	VAV3	Q9UKW4	847 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	GUCA1B	Q9UMX6	200 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	KIAA1024	Q9UPX6	916 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	TRAF3IP3	Q9Y228	551 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	SAR1B	Q9Y6B6	198 aa		11.63	□□□□□ -0.55
TTC17-215	ENST00000534417	POTEB3	A0JP26	581 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	RCCD1	A6NED2	376 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	POTEC	B2RU33	542 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417		E9PMD0	336 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	MARCH6	O60337	910 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	USO1	O60763	962 aa	Known RBP	11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	SEC31A	O94979	1220 aa	Known RBP	11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	APBA3	O96018	575 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	SPATA31C1	P0DKV0	1188 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	ANXA13	P27216	316 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	USP14	P54578	494 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	KCNMA1	Q12791	1236 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	SPA17	Q15506	151 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	NFIL3	Q16649	462 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	RBM26	Q5T8P6	1007 aa	Known RBP	11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	HGSNAT	Q68CP4	663 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	ZNF772	Q68DY9	489 aa	Predicted RBP	11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	POTEB	Q6S5H4	581 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	CCDC155	Q8N6L0	562 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	GLIS3	Q8NEA6	775 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	SCFD1	Q8WVM8	642 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.62	□□□□□ -0.55	6e-7	■■□□□ 11.4
TTC17-215	ENST00000534417	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	PNKP	Q96T60	521 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	PRDM10	Q9NQV6	1147 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	TRIM10	Q9UDY6	481 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	PUF60	Q9UHX1	559 aa	Known RBP	11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	L1RE1	Q9UN81	338 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	TMX2	Q9Y320	296 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	JRKL	Q9Y4A0	524 aa		11.62	□□□□□ -0.55
TTC17-215	ENST00000534417	IGLV3-22	A0A075B6J6	115 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	SPDYE3	A6NKU9	549 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	PDXK	O00764	312 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	EPHB6	O15197	1021 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	SLC16A3	O15427	465 aa	Known RBP	11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	TBC1D12	O60347	775 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	NOL4	O94818	638 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	ATP1A1	P05023	1023 aa	Known RBP	11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	KIF11	P52732	1056 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	CACNB3	P54284	484 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	GIT2	Q14161	759 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	FRMD5	Q7Z6J6	570 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	CATSPER3	Q86XQ3	398 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	RNF10	Q8N5U6	811 aa	Known RBP	11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	MTMR14	Q8NCE2	650 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	FAM151A	Q8WW52	585 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	SECISBP2L	Q93073	1101 aa	Known RBP	11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	GML	Q99445	158 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	VPS33B	Q9H267	617 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	EPC1	Q9H2F5	836 aa		11.61	□□□□□ -0.55
TTC17-215	ENST00000534417	TUFT1	Q9NNX1	390 aa		11.61	□□□□□ -0.55

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