RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 BMPR1AP36894 532 aa14.44□□□□□ -0.1
SVIP-205ENST00000533774 VPS53Q5VIR6 699 aa14.44□□□□□ -0.1
SVIP-205ENST00000533774 DHX37Q8IY37 1157 aaKnown RBP14.44□□□□□ -0.1
SVIP-205ENST00000533774 IFIH1Q9BYX4 1025 aaKnown RBP14.44□□□□□ -0.1
SVIP-205ENST00000533774 RC3H2Q9HBD1 1191 aaKnown RBP14.44□□□□□ -0.1
SVIP-205ENST00000533774 ANAPC4Q9UJX5 808 aa14.44□□□□□ -0.1
SVIP-205ENST00000533774 B4DLN1 442 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 TREHO43280 583 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 EYA4O95677 639 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 CTSHP09668 335 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 SNHG28P0DPA3 235 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 MRPL12P52815 198 aaKnown RBP14.43□□□□□ -0.1
SVIP-205ENST00000533774 STXBP2Q15833 593 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 HSDL1Q3SXM5 330 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 ADGRD2Q7Z7M1 963 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 FIBCD1Q8N539 461 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 NSUN6Q8TEA1 469 aaKnown RBP14.43□□□□□ -0.1
SVIP-205ENST00000533774 SEPT8Q92599 483 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 ASIC4Q96FT7 647 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 PRRX2Q99811 253 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 C16orf70Q9BSU1 422 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 UBA5Q9GZZ9 404 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 CLEC1BQ9P126 229 aa14.43□□□□□ -0.1
SVIP-205ENST00000533774 CCER2I3L3R5 266 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 GOLGA8HP0CJ92 632 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 EIF2AK2P19525 551 aaKnown RBP14.42□□□□□ -0.1
SVIP-205ENST00000533774 DNAJB1P25685 340 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 RRP1P56182 461 aaKnown RBP14.42□□□□□ -0.1
SVIP-205ENST00000533774 SP2Q02086 613 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 LAMC2Q13753 1193 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 CBX2Q14781 532 aaPredicted RBP14.42□□□□□ -0.1
SVIP-205ENST00000533774 MYSM1Q5VVJ2 828 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 ASCL5Q7RTU5 278 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 SUGP1Q8IWZ8 645 aaKnown RBP14.42□□□□□ -0.1
SVIP-205ENST00000533774 ATP6V0A1Q93050 837 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 IL17RAQ96F46 866 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 RMDN3Q96TC7 470 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 LMAN2LQ9H0V9 348 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 BCAS3Q9H6U6 928 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
SVIP-205ENST00000533774 RB1P06400 928 aa14.41□□□□□ -0.1
SVIP-205ENST00000533774 AVPR2P30518 371 aa14.41□□□□□ -0.1
SVIP-205ENST00000533774 FOXK2Q01167 660 aa14.41□□□□□ -0.1
SVIP-205ENST00000533774 RRP12Q5JTH9 1297 aaKnown RBP14.41□□□□□ -0.1
SVIP-205ENST00000533774 ATOH1Q92858 354 aaPredicted RBP14.41□□□□□ -0.1
SVIP-205ENST00000533774 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
SVIP-205ENST00000533774 CLP1Q92989 425 aaKnown RBP14.41□□□□□ -0.1
SVIP-205ENST00000533774 IWS1Q96ST2 819 aa14.41□□□□□ -0.1
SVIP-205ENST00000533774 C11orf84Q9BUA3 381 aaPredicted RBP14.41□□□□□ -0.1
SVIP-205ENST00000533774 RNPEPQ9H4A4 650 aa14.41□□□□□ -0.1
SVIP-205ENST00000533774 TCP11L1Q9NUJ3 509 aa14.41□□□□□ -0.1
SVIP-205ENST00000533774 PNMA2Q9UL42 364 aa14.41□□□□□ -0.1
SVIP-205ENST00000533774 CIZ1Q9ULV3 898 aaPredicted RBP14.41□□□□□ -0.1
SVIP-205ENST00000533774 FARP1Q9Y4F1 1045 aaPredicted RBP14.41□□□□□ -0.1
SVIP-205ENST00000533774 MRVI1Q9Y6F6 885 aa14.41□□□□□ -0.1
SVIP-205ENST00000533774 BAZ2BQ9UIF8 2168 aaKnown RBP14.41□□□□□ -0.1
SVIP-205ENST00000533774 C17orf102A2RUQ5 167 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 H0Y858 1186 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 PPFIA4O75335 1185 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 GLP2RO95838 553 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 PDGFBP01127 241 aaPredicted RBP14.4□□□□□ -0.1
SVIP-205ENST00000533774 MMP1P03956 469 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 NR3C2P08235 984 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 SMIM10L2AP0DMW4 78 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 SMIM10L2BP0DMW5 78 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 PKN1Q16512 942 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 CELF3Q5SZQ8 465 aaKnown RBP14.4□□□□□ -0.1
SVIP-205ENST00000533774 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 SMRP1Q8NCR6 262 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 PI4K2BQ8TCG2 481 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 OTUD7AQ8TE49 926 aaPredicted RBP14.4□□□□□ -0.1
SVIP-205ENST00000533774 FAM212AQ96EL1 285 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 ZFP91Q96JP5 570 aaPredicted RBP14.4□□□□□ -0.1
SVIP-205ENST00000533774 PXMP2Q9NR77 195 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 TLR9Q9NR96 1032 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 SUPT16HQ9Y5B9 1047 aaKnown RBP14.4□□□□□ -0.1
SVIP-205ENST00000533774 WDR87Q6ZQQ6 2873 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 ADGRA3Q8IWK6 1321 aa14.4□□□□□ -0.1
SVIP-205ENST00000533774 OPLAHO14841 1288 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 EIF3JO75822 258 aaKnown RBP14.39□□□□□ -0.11
SVIP-205ENST00000533774 GGPS1O95749 300 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 NDUFV1P49821 464 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 SIGLEC14Q08ET2 396 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 CDC37Q16543 378 aaPredicted RBP14.39□□□□□ -0.11
SVIP-205ENST00000533774 ARHGEF16Q5VV41 709 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 IL31RAQ8NI17 732 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 ZNF689Q96CS4 500 aaPredicted RBP14.39□□□□□ -0.11
SVIP-205ENST00000533774 SPATA33Q96N06 139 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 FSD1Q9BTV5 496 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 TOMM22Q9NS69 142 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 PLAGL2Q9UPG8 496 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 USP15Q9Y4E8 981 aaPredicted RBP14.39□□□□□ -0.11
SVIP-205ENST00000533774 PCDHGC5Q9Y5F6 944 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 FNDC1Q4ZHG4 1894 aaPredicted RBP14.39□□□□□ -0.11
SVIP-205ENST00000533774 ABCB11O95342 1321 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 GVINP1Q7Z2Y8 2422 aa14.39□□□□□ -0.11
SVIP-205ENST00000533774 PROB1E7EW31 1015 aa14.38□□□□□ -0.11
SVIP-205ENST00000533774 RBM10P98175 930 aaKnown RBP14.38□□□□□ -0.11
SVIP-205ENST00000533774 COASYQ13057 564 aa14.38□□□□□ -0.11
SVIP-205ENST00000533774 SETD4Q9NVD3 440 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms