RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 GSPT1P15170 499 aaKnown RBP11.66□□□□□ -0.54
COLCA1-203ENST00000532918 NR2F2P24468 414 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 STAT3P40763 770 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 CPDO75976 1380 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 SPATA31A5Q5VU36 1347 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 SPATA31A7Q8IWB4 1347 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 S100BP04271 92 aaPredicted RBP11.66□□□□□ -0.54
COLCA1-203ENST00000532918 CYP21A2P08686 494 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 H2AFZP0C0S5 128 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 MARK3P27448 753 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 CHRNA5P30532 468 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 MAP2K2P36507 400 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 SCRN1Q12765 414 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 H2AFVQ71UI9 128 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 RUNDC3BQ96NL0 473 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 USP28Q96RU2 1077 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 MTA3Q9BTC8 594 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 CBX8Q9HC52 389 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 PLCB1Q9NQ66 1216 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 SYNJ2BP-COX16A0A087WUM0 186 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 A0A1W2PQ27 194 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 A0A1W2PQ64 194 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 A0A1W2PQD8 194 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 ABCB4P21439 1286 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
COLCA1-203ENST00000532918 CDC42EP1Q00587 391 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 ZBTB17Q13105 803 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 RUFY4Q6ZNE9 571 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
COLCA1-203ENST00000532918 TRIM58Q8NG06 486 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 STRBPQ96SI9 672 aaKnown RBP11.66□□□□□ -0.54
COLCA1-203ENST00000532918 VCX3BQ9H321 246 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 KIAA1586Q9HCI6 787 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.66□□□□□ -0.54
COLCA1-203ENST00000532918 COX16Q9P0S2 106 aa11.66□□□□□ -0.54
COLCA1-203ENST00000532918 KIF28PB7ZC32 967 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 AFPP02771 609 aaKnown RBP11.65□□□□□ -0.54
COLCA1-203ENST00000532918 KCNJ6P48051 423 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 TSPY1Q01534 308 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 LMNB2Q03252 620 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 TRIM28Q13263 835 aaKnown RBP11.65□□□□□ -0.54
COLCA1-203ENST00000532918 PPP2R5CQ13362 524 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 SKIV2LQ15477 1246 aaKnown RBP11.65□□□□□ -0.54
COLCA1-203ENST00000532918 SLC15A2Q16348 729 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 ARL13BQ3SXY8 428 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 SPATA1Q5VX52 437 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 RBSNQ9H1K0 784 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 MMP1P03956 469 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 ARL4AP40617 200 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 MCAMP43121 646 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 EVCP57679 992 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 POLR2FP61218 127 aaKnown RBP11.65□□□□□ -0.54
COLCA1-203ENST00000532918 PDE1CQ14123 709 aaPredicted RBP11.65□□□□□ -0.54
COLCA1-203ENST00000532918 HHATQ5VTY9 493 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 HDXQ7Z353 690 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 RGS12O14924 1447 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 ZNF75DP51815 510 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 PAK2Q13177 524 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 SH2D4BQ5SQS7 431 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 TWF2Q6IBS0 349 aaKnown RBP11.65□□□□□ -0.54
COLCA1-203ENST00000532918 PI16Q6UXB8 463 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 INTS8Q75QN2 995 aaKnown RBP11.65□□□□□ -0.54
COLCA1-203ENST00000532918 STMN2Q93045 179 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 MYCBPQ99417 103 aaPredicted RBP11.65□□□□□ -0.54
COLCA1-203ENST00000532918 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 VPS37BQ9H9H4 285 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 VPS18Q9P253 973 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 CIB2O75838 187 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 HOXA13P31271 388 aaPredicted RBP11.65□□□□□ -0.54
COLCA1-203ENST00000532918 BFSP1Q12934 665 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 SLC39A14Q15043 492 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 RPGRIP1Q96KN7 1286 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 KATNAL1Q9BW62 490 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 VCXQ9H320 206 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 ELP3Q9H9T3 547 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 PIDD1Q9HB75 910 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 ZSWIM5Q9P217 1185 aa11.65□□□□□ -0.54
COLCA1-203ENST00000532918 GARSP41250 739 aaKnown RBP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 MAPK6Q16659 721 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 WHAMMP3Q1A5X7 153 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 GANCQ8TET4 914 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 KRT12Q99456 494 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 GCOM2Q9BZD3 368 aaPredicted RBP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 ZNF302Q9NR11 478 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 TACC3Q9Y6A5 838 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 MYO1FO00160 1098 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 BRD1O95696 1058 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 IFNB1P01574 187 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 CETPP11597 493 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 PRDX5P30044 214 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 MAN1A1P33908 653 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 MMP14P50281 582 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 ATP11AP98196 1134 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 UBE2SQ16763 222 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 KYAT1Q16773 422 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 POTEDQ86YR6 584 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 NCAPGQ9BPX3 1015 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms