RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 VCAM1P19320 739 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 SAT1P21673 171 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 WASHC5Q12768 1159 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 STRN3Q13033 797 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 RAB3GAP1Q15042 981 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 FSCBQ5H9T9 825 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 DEPDC1Q5TB30 811 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 TADA2BQ86TJ2 420 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 AHI1Q8N157 1196 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 MLKLQ8NB16 471 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 ASZ1Q8WWH4 475 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 TMEM245Q9H330 911 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 MRPL40Q9NQ50 206 aaKnown RBP7.83□□□□□ -1.16
CTNND1-229ENST00000531014 SYBUQ9NX95 663 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.83□□□□□ -1.16
CTNND1-229ENST00000531014 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-229ENST00000531014 PASKQ96RG2 1323 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 SYNRGQ9UMZ2 1314 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 ZNF142P52746 1687 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-229ENST00000531014 SPDYE2BA6NHP3 402 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 GOLGA8RI6L899 631 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 PDE8AO60658 829 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 SPDYE6P0CI01 402 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 ALDH1L2Q3SY69 923 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 TCP11X2Q5H9J9 407 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 KCTD16Q68DU8 428 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 PODNQ7Z5L7 613 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 TBC1D1Q86TI0 1168 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-229ENST00000531014 MYLK4Q86YV6 388 aaPredicted RBP7.83□□□□□ -1.16
CTNND1-229ENST00000531014 TTLL11Q8NHH1 800 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 LZICQ8WZA0 190 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 OSBPL1AQ9BXW6 950 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 MID2Q9UJV3 735 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 ROBO1Q9Y6N7 1651 aa7.83□□□□□ -1.16
CTNND1-229ENST00000531014 NEURL4Q96JN8 1562 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 KCNK3O14649 394 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 ATP5HO75947 161 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 YWHAGP61981 247 aaKnown RBP eCLIP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 AP1B1Q10567 949 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 PAK1Q13153 545 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 PDCLQ13371 301 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 ELMSAN1Q6PJG2 1045 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 CAPN12Q6ZSI9 719 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 USP50Q70EL3 339 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 SRRM1Q8IYB3 904 aaKnown RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 SMYD2Q9NRG4 433 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 EHD2Q9NZN4 543 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 ERVV-1B6SEH8 477 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 NOP56O00567 594 aaKnown RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 MAPK13O15264 365 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 TSPY1Q01534 308 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 SLC12A1Q13621 1099 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 CYLC2Q14093 348 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 HADHQ16836 314 aaKnown RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 NCAPG2Q86XI2 1143 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 KSR1Q8IVT5 923 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 UHMK1Q8TAS1 419 aaKnown RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 SKA2Q8WVK7 121 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 CASP10Q92851 521 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 USP26Q9BXU7 913 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 PLEKHA4Q9H4M7 779 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 PARVBQ9HBI1 364 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 RWDD3Q9Y3V2 267 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 LOC102724159A0A0B4J2E5 919 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 RNF103-CHMP3A0A140T963 221 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 A0A1B0GVL5 298 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 GOLGA8FQ08AF8 430 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 GOLGA8DPQ0D2H9 430 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 MED21Q13503 144 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 KRT81Q14533 505 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 PWP2Q15269 919 aaKnown RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 RAPH1Q70E73 1250 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 TRIM50Q86XT4 487 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 MTBPQ96DY7 904 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 OSBPL9Q96SU4 736 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 NDEL1Q9GZM8 345 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 KIF9Q9HAQ2 790 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 MYO1AQ9UBC5 1043 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 ZNRF3Q9ULT6 936 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 USP19O94966 1318 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 MYO1CO00159 1063 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 CD19P15391 556 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 COPB1P53618 953 aaKnown RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 KIF23Q02241 960 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 TSTA3Q13630 321 aaPredicted RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 ATAD3BQ5T9A4 648 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 TTC22Q5TAA0 569 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 RTL9Q8NET4 1388 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 ARHGEF1Q92888 912 aaKnown RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 NLRP4Q96MN2 994 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 CSRNP1Q96S65 589 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 TRPV6Q9H1D0 765 aa7.82□□□□□ -1.16
CTNND1-229ENST00000531014 GEMIN8Q9NWZ8 242 aaKnown RBP7.82□□□□□ -1.16
CTNND1-229ENST00000531014 POC1B-GALNT4F8VUJ3 575 aa7.81□□□□□ -1.16
CTNND1-229ENST00000531014 DCTN3O75935 186 aa7.81□□□□□ -1.16
CTNND1-229ENST00000531014 RPN1P04843 607 aaKnown RBP7.81□□□□□ -1.16
CTNND1-229ENST00000531014 CAPN1P07384 714 aa7.81□□□□□ -1.16
CTNND1-229ENST00000531014 MAP4P27816 1152 aaKnown RBP7.81□□□□□ -1.16
CTNND1-229ENST00000531014 MDM2Q00987 491 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-229ENST00000531014 COPS6Q7L5N1 327 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms