RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 SIPA1L3O60292 1781 aaPredicted RBP9.39□□□□□ -0.91
CHKA-205ENST00000530730 DLEC1Q9Y238 1755 aa9.39□□□□□ -0.91
CHKA-205ENST00000530730 ANKRD31Q8N7Z5 1873 aa9.38□□□□□ -0.91
CHKA-205ENST00000530730 DUSP4Q13115 394 aa9.38□□□□□ -0.91
CHKA-205ENST00000530730 CCDC93Q567U6 631 aa9.38□□□□□ -0.91
CHKA-205ENST00000530730 C1QL4Q86Z23 238 aa9.38□□□□□ -0.91
CHKA-205ENST00000530730 IRF2BP1Q8IU81 584 aa9.38□□□□□ -0.91
CHKA-205ENST00000530730 NGEFQ8N5V2 710 aa9.38□□□□□ -0.91
CHKA-205ENST00000530730 SYTL5Q8TDW5 730 aaPredicted RBP9.38□□□□□ -0.91
CHKA-205ENST00000530730 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHKA-205ENST00000530730 EHMT1Q9H9B1 1298 aa9.38□□□□□ -0.91
CHKA-205ENST00000530730 COPRSQ9NQ92 184 aa9.38□□□□□ -0.91
CHKA-205ENST00000530730 ZNF277Q9NRM2 450 aaPredicted RBP9.38□□□□□ -0.91
CHKA-205ENST00000530730 SCN7AQ01118 1682 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 SHISA3A0PJX4 238 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 UBOX5O94941 541 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 GLDCP23378 1020 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 CFPP27918 469 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 ALDH1B1P30837 517 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 GBP1P32455 592 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 SNX17Q15036 470 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 CDCP2Q5VXM1 449 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 SPPL2CQ8IUH8 684 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 SIAH1Q8IUQ4 282 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 RTKN2Q8IZC4 609 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 ANKS4BQ8N8V4 417 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 ZSCAN18Q8TBC5 510 aaPredicted RBP9.37□□□□□ -0.91
CHKA-205ENST00000530730 PLEKHF1Q96S99 279 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 RNF32Q9H0A6 362 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 TAF1DQ9H5J8 278 aaPredicted RBP9.37□□□□□ -0.91
CHKA-205ENST00000530730 CWC22Q9HCG8 908 aaKnown RBP9.37□□□□□ -0.91
CHKA-205ENST00000530730 SLX4Q8IY92 1834 aa9.37□□□□□ -0.91
CHKA-205ENST00000530730 IQCA1LA6NCM1 817 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 ERVV-1B6SEH8 477 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 C1QTNF9P0C862 333 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 HSPA1AP0DMV8 641 aaKnown RBP9.36□□□□□ -0.91
CHKA-205ENST00000530730 HSPA1BP0DMV9 641 aaKnown RBP9.36□□□□□ -0.91
CHKA-205ENST00000530730 CCNFP41002 786 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 EIF4A1P60842 406 aaKnown RBP9.36□□□□□ -0.91
CHKA-205ENST00000530730 TTLL7Q6ZT98 887 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 HS2ST1Q7LGA3 356 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 REXO1Q8N1G1 1221 aaKnown RBP9.36□□□□□ -0.91
CHKA-205ENST00000530730 SYNE4Q8N205 404 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 PNISRQ8TF01 805 aaKnown RBP9.36□□□□□ -0.91
CHKA-205ENST00000530730 LINC01599Q8WXQ3 324 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 THUMPD2Q9BTF0 503 aaKnown RBP9.36□□□□□ -0.91
CHKA-205ENST00000530730 BCL2L13Q9BXK5 485 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 BCL11AQ9H165 835 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 SLC6A17Q9H1V8 727 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 BRMS1Q9HCU9 246 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 RRP7AQ9Y3A4 280 aaKnown RBP9.36□□□□□ -0.91
CHKA-205ENST00000530730 PCDHB14Q9Y5E9 798 aa9.36□□□□□ -0.91
CHKA-205ENST00000530730 COL11A2P13942 1736 aaPredicted RBP9.36□□□□□ -0.91
CHKA-205ENST00000530730 ZNF541Q9H0D2 1346 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 FZD9O00144 591 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 TLR3O15455 904 aaKnown RBP9.35□□□□□ -0.91
CHKA-205ENST00000530730 RAD51AP2Q09MP3 1159 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 NMIQ13287 307 aaPredicted RBP9.35□□□□□ -0.91
CHKA-205ENST00000530730 NFE2L2Q16236 605 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 CLEC16AQ2KHT3 1053 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 FER1L6Q2WGJ9 1857 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 CRY2Q49AN0 593 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 ARSHQ5FYA8 562 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 RNF111Q6ZNA4 994 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 LDHDQ86WU2 507 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 DAGLBQ8NCG7 672 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 ZNF296Q8WUU4 475 aaPredicted RBP9.35□□□□□ -0.91
CHKA-205ENST00000530730 HDAC8Q9BY41 377 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 ASCC2Q9H1I8 757 aaPredicted RBP9.35□□□□□ -0.91
CHKA-205ENST00000530730 CD320Q9NPF0 282 aa9.35□□□□□ -0.91
CHKA-205ENST00000530730 MAP3K15Q6ZN16 1313 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 PASKQ96RG2 1323 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 CCDC88AQ3V6T2 1871 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 TMEM253P0C7T8 217 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 MYL6BP14649 208 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 RAG1P15918 1043 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 TRHRP34981 398 aaPredicted RBP9.34□□□□□ -0.91
CHKA-205ENST00000530730 IARSP41252 1262 aaKnown RBP9.34□□□□□ -0.91
CHKA-205ENST00000530730 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 SUSD4Q5VX71 490 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 LRRC56Q8IYG6 542 aaPredicted RBP9.34□□□□□ -0.91
CHKA-205ENST00000530730 KRTAP4-7Q9BYR0 210 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 NYXQ9GZU5 481 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 CNNM2Q9H8M5 875 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 HACL1Q9UJ83 578 aa9.34□□□□□ -0.91
CHKA-205ENST00000530730 YBX2Q9Y2T7 364 aaKnown RBP9.34□□□□□ -0.91
CHKA-205ENST00000530730 TIAM2Q8IVF5 1701 aa9.34□□□□□ -0.92
CHKA-205ENST00000530730 GPTP24298 496 aa9.33□□□□□ -0.92
CHKA-205ENST00000530730 EPHX2P34913 555 aa9.33□□□□□ -0.92
CHKA-205ENST00000530730 CRKP46108 304 aa9.33□□□□□ -0.92
CHKA-205ENST00000530730 NBPF12Q5TAG4 269 aaPredicted RBP9.33□□□□□ -0.92
CHKA-205ENST00000530730 KIF6Q6ZMV9 814 aa9.33□□□□□ -0.92
CHKA-205ENST00000530730 ZNF34Q8IZ26 560 aa9.33□□□□□ -0.92
CHKA-205ENST00000530730 ZNF655Q8N720 491 aaPredicted RBP9.33□□□□□ -0.92
CHKA-205ENST00000530730 PSMD1Q99460 953 aa9.33□□□□□ -0.92
CHKA-205ENST00000530730 G6PC3Q9BUM1 346 aa9.33□□□□□ -0.92
CHKA-205ENST00000530730 GGT7Q9UJ14 662 aa9.33□□□□□ -0.92
CHKA-205ENST00000530730 ABCC12Q96J65 1359 aa9.33□□□□□ -0.92
CHKA-205ENST00000530730 UBN2Q6ZU65 1347 aa9.32□□□□□ -0.92
CHKA-205ENST00000530730 BCORQ6W2J9 1755 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms