RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 IER2Q9BTL4 223 aa5.12□□□□□ -1.59
CTR9-205ENST00000529898 SMOC1Q9H4F8 434 aa5.12□□□□□ -1.59
CTR9-205ENST00000529898 USP40Q9NVE5 1235 aa5.12□□□□□ -1.59
CTR9-205ENST00000529898 MSRB2Q9Y3D2 182 aa5.12□□□□□ -1.59
CTR9-205ENST00000529898 R3HCC1Q9Y3T6 440 aaKnown RBP5.12□□□□□ -1.59
CTR9-205ENST00000529898 IQCA1LA6NCM1 817 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 DGKIO75912 1065 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 LRG1P02750 347 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 HSP90AA1P07900 732 aaKnown RBP5.11□□□□□ -1.59
CTR9-205ENST00000529898 NKX3-2P78367 333 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 SPATS1Q496A3 300 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 UBXN11Q5T124 520 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 TAF3Q5VWG9 929 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 ARRDC4Q8NCT1 418 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 TTLL11Q8NHH1 800 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 OSBP2Q969R2 916 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 TOE1Q96GM8 510 aaKnown RBP5.11□□□□□ -1.59
CTR9-205ENST00000529898 ZFYVE21Q9BQ24 234 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 PDCL3Q9H2J4 239 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 SLC6A20Q9NP91 592 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 ARHGEF4Q9NR80 690 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 ST7Q9NRC1 585 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 CLDND1Q9NY35 253 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 DTLQ9NZJ0 730 aa5.11□□□□□ -1.59
CTR9-205ENST00000529898 NOP58Q9Y2X3 529 aaKnown RBP5.11□□□□□ -1.59
CTR9-205ENST00000529898 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 MSCO60682 206 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 ITGB3P05106 788 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 ZNF28P17035 718 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 STAT5AP42229 794 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 PLP2Q04941 152 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 KIAA2012Q0VF49 1180 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 NTRK3Q16288 839 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 HABP4Q5JVS0 413 aaKnown RBP5.1□□□□□ -1.59
CTR9-205ENST00000529898 TEPPQ6URK8 271 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 DBX2Q6ZNG2 339 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 PRRT2Q7Z6L0 340 aaPredicted RBP5.1□□□□□ -1.59
CTR9-205ENST00000529898 FERMT3Q86UX7 667 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 DCAF4Q8WV16 495 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 MAP7D2Q96T17 732 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 AARSD1Q9BTE6 412 aaKnown RBP5.1□□□□□ -1.59
CTR9-205ENST00000529898 BDH2Q9BUT1 245 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 CECR2Q9BXF3 1484 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 CHMP4BQ9H444 224 aaKnown RBP5.1□□□□□ -1.59
CTR9-205ENST00000529898 ASH2LQ9UBL3 628 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 LAS1LQ9Y4W2 734 aaKnown RBP5.1□□□□□ -1.59
CTR9-205ENST00000529898 PCDHB4Q9Y5E5 795 aa5.1□□□□□ -1.59
CTR9-205ENST00000529898 MAFKO60675 156 aa5.09□□□□□ -1.59
CTR9-205ENST00000529898 ADRB1P08588 477 aa5.09□□□□□ -1.59
CTR9-205ENST00000529898 PABPC1P11940 636 aaKnown RBP5.09□□□□□ -1.59
CTR9-205ENST00000529898 RGL3Q3MIN7 710 aa5.09□□□□□ -1.59
CTR9-205ENST00000529898 STYK1Q6J9G0 422 aa5.09□□□□□ -1.59
CTR9-205ENST00000529898 LBX2Q6XYB7 198 aa5.09□□□□□ -1.59
CTR9-205ENST00000529898 TRIM48Q8IWZ4 208 aa5.09□□□□□ -1.59
CTR9-205ENST00000529898 TXNDC5Q8NBS9 432 aaKnown RBP5.09□□□□□ -1.59
CTR9-205ENST00000529898 PHF20Q9BVI0 1012 aa5.09□□□□□ -1.59
CTR9-205ENST00000529898 SSBP3Q9BWW4 388 aaPredicted RBP5.09□□□□□ -1.59
CTR9-205ENST00000529898 MYOTQ9UBF9 498 aa5.09□□□□□ -1.59
CTR9-205ENST00000529898 WASF3Q9UPY6 502 aa5.09□□□□□ -1.59
CTR9-205ENST00000529898 MROH6A6NGR9 719 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 KRIT1O00522 736 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 IGSF3O75054 1194 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 CNR2P34972 360 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 RBM25P49756 843 aaKnown RBP5.08□□□□□ -1.6
CTR9-205ENST00000529898 UTP14CQ5TAP6 766 aaKnown RBP5.08□□□□□ -1.6
CTR9-205ENST00000529898 OTOP3Q7RTS5 596 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 PROSER1Q86XN7 944 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 CNPY4Q8N129 248 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 DDX1Q92499 740 aaKnown RBP5.08□□□□□ -1.6
CTR9-205ENST00000529898 MBD6Q96DN6 1003 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 CHAMP1Q96JM3 812 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 TMEM209Q96SK2 561 aa5.08□□□□□ -1.6
CTR9-205ENST00000529898 K7ESM1 405 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 DDX3XO00571 662 aaKnown RBP eCLIP5.07□□□□□ -1.6
CTR9-205ENST00000529898 PLATP00750 562 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 IL13P35225 146 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 GPR85P60893 370 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 ZC3H6P61129 1189 aaKnown RBP5.07□□□□□ -1.6
CTR9-205ENST00000529898 KIZQ2M2Z5 673 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 TBC1D10BQ4KMP7 808 aaPredicted RBP5.07□□□□□ -1.6
CTR9-205ENST00000529898 NBPF6Q5VWK0 638 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 PKN3Q6P5Z2 889 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 HHIPL2Q6UWX4 724 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 NSMFQ6X4W1 530 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 USP53Q70EK8 1073 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 STK32CQ86UX6 486 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 SMAP1Q8IYB5 467 aaPredicted RBP5.07□□□□□ -1.6
CTR9-205ENST00000529898 LGI4Q8N135 537 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 LRRC47Q8N1G4 583 aaKnown RBP5.07□□□□□ -1.6
CTR9-205ENST00000529898 TTC9BQ8N6N2 239 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 UHMK1Q8TAS1 419 aaKnown RBP5.07□□□□□ -1.6
CTR9-205ENST00000529898 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.07□□□□□ -1.6
CTR9-205ENST00000529898 CLEC4DQ8WXI8 215 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 NBPF4Q96M43 638 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 JAM3Q9BX67 310 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 CCDC113Q9H0I3 377 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 PPARGC1AQ9UBK2 798 aaKnown RBP5.07□□□□□ -1.6
CTR9-205ENST00000529898 JAG2Q9Y219 1238 aa5.07□□□□□ -1.6
CTR9-205ENST00000529898 WRNQ14191 1432 aaPredicted RBP eCLIP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms