RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 CACNA2D4Q7Z3S7 1137 aa11.33□□□□□ -0.6
MSRA-210ENST00000528246 YTHDF3Q7Z739 585 aaKnown RBP11.33□□□□□ -0.6
MSRA-210ENST00000528246 TADA2BQ86TJ2 420 aa11.33□□□□□ -0.6
MSRA-210ENST00000528246 NBPF5PQ86XG9 351 aaPredicted RBP11.33□□□□□ -0.6
MSRA-210ENST00000528246 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
MSRA-210ENST00000528246 CALR3Q96L12 384 aaKnown RBP11.33□□□□□ -0.6
MSRA-210ENST00000528246 MMRN2Q9H8L6 949 aa11.33□□□□□ -0.6
MSRA-210ENST00000528246 SLC39A2Q9NP94 309 aa11.33□□□□□ -0.6
MSRA-210ENST00000528246 DMGDHQ9UI17 866 aaKnown RBP11.33□□□□□ -0.6
MSRA-210ENST00000528246 ATP6V0A2Q9Y487 856 aa11.33□□□□□ -0.6
MSRA-210ENST00000528246 QSER1Q2KHR3 1735 aa11.33□□□□□ -0.6
MSRA-210ENST00000528246 KIF13BQ9NQT8 1826 aa11.33□□□□□ -0.6
MSRA-210ENST00000528246 WTIPA6NIX2 430 aaPredicted RBP11.32□□□□□ -0.6
MSRA-210ENST00000528246 MYBP10242 640 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
MSRA-210ENST00000528246 GRAPQ13588 217 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 MEI1Q5TIA1 1274 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 MOXD1Q6UVY6 613 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 LRIG3Q6UXM1 1119 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 KDM7AQ6ZMT4 941 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 KRT26Q7Z3Y9 468 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 COL23A1Q86Y22 540 aaPredicted RBP11.32□□□□□ -0.6
MSRA-210ENST00000528246 TRIM59Q8IWR1 403 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 GRAPLQ8TC17 118 aaPredicted RBP11.32□□□□□ -0.6
MSRA-210ENST00000528246 TBC1D22AQ8WUA7 517 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 DNAJC19Q96DA6 116 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 DYNLL2Q96FJ2 89 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 PLCB1Q9NQ66 1216 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 FAM207AQ9NSI2 230 aaPredicted RBP11.32□□□□□ -0.6
MSRA-210ENST00000528246 TMEM59LQ9UK28 342 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 DAAM1Q9Y4D1 1078 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 GAKO14976 1311 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 GRIN2DO15399 1336 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 FRMD3A2A2Y4 597 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 BHMG1C9JSJ3 638 aaPredicted RBP11.32□□□□□ -0.6
MSRA-210ENST00000528246 EPHB6O15197 1021 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 GFPT2O94808 682 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 PLEKP08567 350 aaPredicted RBP11.32□□□□□ -0.6
MSRA-210ENST00000528246 IL1R1P14778 569 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 TNNC1P63316 161 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
MSRA-210ENST00000528246 KCNMA1Q12791 1236 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 CUL1Q13616 776 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 FAM83BQ5T0W9 1011 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 MSL1Q68DK7 614 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 TGFBRAP1Q8WUH2 860 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 DDX12PQ92771 950 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 PBKQ96KB5 322 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 INPP4AQ96PE3 977 aaPredicted RBP11.32□□□□□ -0.6
MSRA-210ENST00000528246 PLIN2Q99541 437 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 MXD3Q9BW11 206 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 MLXIPQ9HAP2 919 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 INTUQ9ULD6 942 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 TFR2Q9UP52 801 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 SUGT1Q9Y2Z0 365 aa11.32□□□□□ -0.6
MSRA-210ENST00000528246 IGKV6D-41A0A0C4DH26 115 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 HMGB1P1B2RPK0 211 aaPredicted RBP11.31□□□□□ -0.6
MSRA-210ENST00000528246 PDHBP11177 359 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 TXKP42681 527 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 GPR162Q16538 588 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 CDC37Q16543 378 aaPredicted RBP11.31□□□□□ -0.6
MSRA-210ENST00000528246 SPDYCQ5MJ68 293 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 FAM26FQ5R3K3 315 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 NFRKBQ6P4R8 1299 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 FOXR1Q6PIV2 292 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 MICALCLQ6ZW33 695 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 FMNL3Q8IVF7 1028 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 CCDC65Q8IXS2 484 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 ARFGAP2Q8N6H7 521 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 SNX29Q8TEQ0 813 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 MTMR8Q96EF0 704 aa11.31□□□□□ -0.6
MSRA-210ENST00000528246 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
MSRA-210ENST00000528246 TAF1LQ8IZX4 1826 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 A0A0A6YYK5 440 aaPredicted RBP11.3□□□□□ -0.6
MSRA-210ENST00000528246 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 NOL4O94818 638 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 HSPA9P38646 679 aaKnown RBP11.3□□□□□ -0.6
MSRA-210ENST00000528246 USP8P40818 1118 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 PRKCIP41743 596 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 MRPL12P52815 198 aaKnown RBP11.3□□□□□ -0.6
MSRA-210ENST00000528246 COASYQ13057 564 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 GPATCH4Q5T3I0 446 aaKnown RBP11.3□□□□□ -0.6
MSRA-210ENST00000528246 ICE2Q659A1 982 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 ACTRT1Q8TDG2 376 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 MBOAT7Q96N66 472 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 TRERF1Q96PN7 1200 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 PIGSQ96S52 555 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 YY1AP1Q9H869 796 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 RBM12Q9NTZ6 932 aaKnown RBP11.3□□□□□ -0.6
MSRA-210ENST00000528246 PCDHA2Q9Y5H9 948 aa11.3□□□□□ -0.6
MSRA-210ENST00000528246 CYP3A7-CYP3A51PA0A087WV96 503 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 ZPR1O75312 459 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 CYP3A7P24462 503 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 SLC1A4P43007 532 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 USP11P51784 963 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 NPEPPSP55786 919 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 RASSF7Q02833 373 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 CLUL1Q15846 466 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 CFAP58Q5T655 872 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms