RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 KCNJ6P48051 423 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 RABGGTBP53611 331 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 SEMA3FQ13275 785 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 TRIM71Q2Q1W2 868 aaKnown RBP16.3■□□□□ 0.2
CAPN1-212ENST00000527887 SERINC5Q86VE9 423 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 MICU3Q86XE3 530 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 HERC6Q8IVU3 1022 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 ZNF713Q8N859 430 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-212ENST00000527887 GPR20Q99678 358 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 LRRC2Q9BYS8 371 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
CAPN1-212ENST00000527887 ZNF215Q9UL58 517 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-212ENST00000527887 COL9A3Q14050 684 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-212ENST00000527887 GPNMBQ14956 572 aa16.29■□□□□ 0.2
CAPN1-212ENST00000527887 PPP1R18Q6NYC8 613 aa16.29■□□□□ 0.2
CAPN1-212ENST00000527887 CMTR1Q8N1G2 835 aaKnown RBP16.29■□□□□ 0.2
CAPN1-212ENST00000527887 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
CAPN1-212ENST00000527887 SYMPKQ92797 1274 aaKnown RBP16.29■□□□□ 0.2
CAPN1-212ENST00000527887 ATP6V0A1Q93050 837 aa16.29■□□□□ 0.2
CAPN1-212ENST00000527887 ZFP91Q96JP5 570 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-212ENST00000527887 CHD7Q9P2D1 2997 aa16.29■□□□□ 0.2
CAPN1-212ENST00000527887 BAZ2BQ9UIF8 2168 aaKnown RBP16.28■□□□□ 0.2
CAPN1-212ENST00000527887 CCDC196A0A1B0GTZ2 297 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 SORBS3O60504 671 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 NBNO60934 754 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 FOSP01100 380 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-212ENST00000527887 SMIM10L2AP0DMW4 78 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 SMIM10L2BP0DMW5 78 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 IKBKEQ14164 716 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 RTN1Q16799 776 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 ZNF618Q5T7W0 954 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 HEATR3Q7Z4Q2 680 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 RASEFQ8IZ41 740 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 KCNB2Q92953 911 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 RNPEPQ9H4A4 650 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 PCDHA6Q9UN73 950 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 PCDHA8Q9Y5H6 950 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 UBIAD1Q9Y5Z9 338 aa16.28■□□□□ 0.2
CAPN1-212ENST00000527887 RSPH10B2B2RC85 870 aa16.27■□□□□ 0.2
CAPN1-212ENST00000527887 CA3P07451 260 aa16.27■□□□□ 0.2
CAPN1-212ENST00000527887 RSPH10BP0C881 870 aa16.27■□□□□ 0.2
CAPN1-212ENST00000527887 POU3F3P20264 500 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-212ENST00000527887 WDR5P61964 334 aaKnown RBP16.27■□□□□ 0.2
CAPN1-212ENST00000527887 ZNF200P98182 395 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-212ENST00000527887 ADGRE1Q14246 886 aa16.27■□□□□ 0.2
CAPN1-212ENST00000527887 TRAF7Q6Q0C0 670 aa16.27■□□□□ 0.2
CAPN1-212ENST00000527887 SEPT1Q8WYJ6 367 aa16.27■□□□□ 0.2
CAPN1-212ENST00000527887 COL25A1Q9BXS0 654 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-212ENST00000527887 BCAS3Q9H6U6 928 aa16.27■□□□□ 0.2
CAPN1-212ENST00000527887 JADE2Q9NQC1 790 aa16.27■□□□□ 0.2
CAPN1-212ENST00000527887 NRCAMQ92823 1304 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 EPB41L2O43491 1005 aaKnown RBP16.26■□□□□ 0.19
CAPN1-212ENST00000527887 TLL1O43897 1013 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 LGR5O75473 907 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 MYOGP15173 224 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 KCNA2P16389 499 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 ITGB5P18084 799 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 IGFBP4P22692 258 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 THPOP40225 353 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 FGD1P98174 961 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 FUT2Q10981 343 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 MTMR1Q13613 665 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 ADCK5Q3MIX3 580 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 RAB11FIP4Q86YS3 637 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 FBXL16Q8N461 479 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 ATXN2LQ8WWM7 1075 aaKnown RBP16.26■□□□□ 0.19
CAPN1-212ENST00000527887 TNPO1Q92973 898 aaKnown RBP16.26■□□□□ 0.19
CAPN1-212ENST00000527887 RIC8AQ9NPQ8 531 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 BRPF3Q9ULD4 1205 aa16.26■□□□□ 0.19
CAPN1-212ENST00000527887 TRANK1O15050 2925 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 CNTNAP5Q8WYK1 1306 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 KLF18A0A0U1RQI7 1052 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 hCG_1642624A0A1W2PR95 340 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 GOLGA8AA7E2F4 631 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 GOLGA8BA8MQT2 603 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 TREHO43280 583 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 RPLP2P05387 115 aaKnown RBP16.25■□□□□ 0.19
CAPN1-212ENST00000527887 NAPAP54920 295 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 HIC1Q14526 733 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 UBE2SQ16763 222 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 WWC2Q6AWC2 1192 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 MCTP2Q6DN12 878 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 RPAINQ86UA6 219 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 SKAP1Q86WV1 359 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 WNT8BQ93098 351 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 RAD9AQ99638 391 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 ZBED2Q9BTP6 218 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 TSPYL2Q9H2G4 693 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-212ENST00000527887 BARHL2Q9NY43 387 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 ERAP1Q9NZ08 941 aa16.25■□□□□ 0.19
CAPN1-212ENST00000527887 V9GY48 417 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-212ENST00000527887 VCANP13611 3396 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 GTPBP6O43824 516 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-212ENST00000527887 ATP9AO75110 1047 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 REC8O95072 547 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 GJB5O95377 273 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 HSPA4P34932 840 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 TCF7P36402 384 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-212ENST00000527887 ADAM17P78536 824 aa16.24■□□□□ 0.19
CAPN1-212ENST00000527887 AP3B2Q13367 1082 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms