RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 HOXD8P13378 290 aaPredicted RBP18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 KCNA2P16389 499 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 CHMP4BP1P59074 171 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 NPY5RQ15761 445 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 CHRDL2Q6WN34 429 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 CCDC83Q8IWF9 413 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 DAGLBQ8NCG7 672 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 PPP1R13LQ8WUF5 828 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 ALG1Q9BT22 464 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 PHF20Q9BVI0 1012 aa18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 SH2B1Q9NRF2 756 aaPredicted RBP18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 COLQQ9Y215 455 aaPredicted RBP18.49■□□□□ 0.55
SSSCA1-202ENST00000526433 M0R2N6 131 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 NOP56O00567 594 aaKnown RBP18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 KIAA0355O15063 1070 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 ST18O60284 1047 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 CD4P01730 458 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 MAGEA10P43363 369 aaPredicted RBP18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 MDM2Q00987 491 aaPredicted RBP18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 FAM47CQ5HY64 1035 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 NIPA1Q7RTP0 329 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 IL27Q8NEV9 243 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 GPR20Q99678 358 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 GDF15Q99988 308 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 LBHD1Q9BQE6 289 aaPredicted RBP18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 TRPV6Q9H1D0 765 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 TELO2Q9Y4R8 837 aa18.48■□□□□ 0.55
SSSCA1-202ENST00000526433 FAM86B1E9PN63 330 aa18.47■□□□□ 0.55
SSSCA1-202ENST00000526433 EDIL3O43854 480 aa18.47■□□□□ 0.55
SSSCA1-202ENST00000526433 FAM86B2P0C5J1 330 aa18.47■□□□□ 0.55
SSSCA1-202ENST00000526433 PSEN2P49810 448 aa18.47■□□□□ 0.55
SSSCA1-202ENST00000526433 SP4Q02446 784 aa18.47■□□□□ 0.55
SSSCA1-202ENST00000526433 NFRKBQ6P4R8 1299 aa18.47■□□□□ 0.55
SSSCA1-202ENST00000526433 PLA2G4DQ86XP0 818 aa18.47■□□□□ 0.55
SSSCA1-202ENST00000526433 LLPHQ9BRT6 129 aaKnown RBP18.47■□□□□ 0.55
SSSCA1-202ENST00000526433 AGO4Q9HCK5 861 aaKnown RBP18.47■□□□□ 0.55
SSSCA1-202ENST00000526433 IGLV3-22A0A075B6J6 115 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 B4GALT4O60513 344 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 ZNF286BP0CG31 522 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 RAG1P15918 1043 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 ITGB8P26012 769 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 CIITAP33076 1130 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 USP11P51784 963 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 MFSD10Q14728 455 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 C16orf70Q9BSU1 422 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 PRO3102Q9H379 93 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 TBX21Q9UL17 535 aa18.46■□□□□ 0.55
SSSCA1-202ENST00000526433 GSTTP1A0A1W2PQM5 241 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 HAS3O00219 553 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 F2P00734 622 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 LGALS2P05162 132 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 BMP8BP34820 402 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 KIAA0753Q2KHM9 967 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 UTP14CQ5TAP6 766 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 TBCKQ8TEA7 893 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 SEPT1Q8WYJ6 367 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 BADQ92934 168 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 SDF4Q9BRK5 362 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 KATNAL1Q9BW62 490 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 TRMT13Q9NUP7 481 aaKnown RBP18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 NFASCO94856 1347 aa18.45■□□□□ 0.54
SSSCA1-202ENST00000526433 TRIOBPQ9H2D6 2365 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 H3BRB1 525 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 TIMP1P01033 207 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 SUPT20HL2P0C7V6 817 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 FOSBP53539 338 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 ITGB3BPQ13352 177 aaPredicted RBP18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 NONOQ15233 471 aaKnown RBP eCLIP18.44■□□□□ 0.543e-6■■■■□ 21.9
SSSCA1-202ENST00000526433 PRR16Q569H4 304 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 KRT25Q7Z3Z0 450 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 OXER1Q8TDS5 423 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 UIMC1Q96RL1 719 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 HDAC6Q9UBN7 1215 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 SLC9A2Q9UBY0 812 aa18.44■□□□□ 0.54
SSSCA1-202ENST00000526433 CD2BP2O95400 341 aaKnown RBP18.43■□□□□ 0.54
SSSCA1-202ENST00000526433 TCF7P36402 384 aaPredicted RBP18.43■□□□□ 0.54
SSSCA1-202ENST00000526433 SESTD1Q86VW0 696 aa18.43■□□□□ 0.54
SSSCA1-202ENST00000526433 C7orf31Q8N865 590 aa18.43■□□□□ 0.54
SSSCA1-202ENST00000526433 UBE2OQ9C0C9 1292 aaKnown RBP18.43■□□□□ 0.54
SSSCA1-202ENST00000526433 JPH1Q9HDC5 661 aaPredicted RBP18.43■□□□□ 0.54
SSSCA1-202ENST00000526433 TRIP12Q14669 1992 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 CCDC194A0A1B0GVG4 234 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 IPO5O00410 1097 aaKnown RBP18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 DHX15O43143 795 aaKnown RBP18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 CYP2C9P11712 490 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 KRT2P35908 639 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 MCM2P49736 904 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 SETQ01105 290 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 TRIM29Q14134 588 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 INF2Q27J81 1249 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 KRT40Q6A162 431 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 GDF6Q6KF10 455 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 TMX3Q96JJ7 454 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 ZNF577Q9BSK1 485 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 PPP1R12CQ9BZL4 782 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 LTBP2Q14767 1821 aa18.42■□□□□ 0.54
SSSCA1-202ENST00000526433 KAT6AQ92794 2004 aa18.41■□□□□ 0.54
SSSCA1-202ENST00000526433 CYP3A7-CYP3A51PA0A087WV96 503 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms