RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 COL2A1P02458 1487 aaPredicted RBP18.27■□□□□ 0.52
CCDC90B-203ENST00000525503 ENC1O14682 589 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 GDF11O95390 407 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 RHOXF2BP0C7M4 288 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 BMP3P12645 472 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 SREBF1P36956 1147 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 MMP14P50281 582 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 SLC12A3P55017 1021 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 TRAF1Q13077 416 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 PRR16Q569H4 304 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 BTNL9Q6UXG8 535 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 PPP4R3CPQ6ZMV5 832 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 RRAGAQ7L523 313 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 HDXQ7Z353 690 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 CACNA2D4Q7Z3S7 1137 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 TEX2Q8IWB9 1127 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 RHOXF2Q9BQY4 288 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 IFIH1Q9BYX4 1025 aaKnown RBP18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 ARHGAP20Q9P2F6 1191 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 TFR2Q9UP52 801 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 PCDHA13Q9Y5I0 950 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 MYH7BA7E2Y1 1941 aa18.27■□□□□ 0.51
CCDC90B-203ENST00000525503 FRMD3A2A2Y4 597 aa18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 EPHB6O15197 1021 aa18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 MED24O75448 989 aa18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 EIF4A3P38919 411 aaKnown RBP18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 KIF11P52732 1056 aa18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 MARSP56192 900 aaKnown RBP18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 CYP27A1Q02318 531 aa18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 SMC1AQ14683 1233 aaKnown RBP18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 PDXDC1Q6P996 788 aa18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 TRIM58Q8NG06 486 aa18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 BAP1Q92560 729 aa18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 DNM3Q9UQ16 869 aa18.26■□□□□ 0.51
CCDC90B-203ENST00000525503 LRRC53A6NM62 1247 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 AKR1B10O60218 316 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 TACC1O75410 805 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 TFRCP02786 760 aaKnown RBP18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 MCM3P25205 808 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 STAT3P40763 770 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 BEND6Q5SZJ8 279 aaPredicted RBP18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 CC2D2BQ6DHV5 1058 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 MSL3Q8N5Y2 521 aaKnown RBP18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 SUPT20HQ8NEM7 779 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 SYN2Q92777 582 aaPredicted RBP18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 TDRD3Q9H7E2 651 aaKnown RBP18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 EMILIN3Q9NT22 766 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 CEP72Q9P209 647 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 HDAC6Q9UBN7 1215 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 FAM184BQ9ULE4 1060 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 MACROD2A1Z1Q3 448 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 MAP2K7O14733 419 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 ZNF263O14978 683 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 GH2P01242 217 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 PLEKP08567 350 aaPredicted RBP18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 RPA1P27694 616 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 CIITAP33076 1130 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 SPIRE1Q08AE8 756 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 GPS2Q13227 327 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 EDRF1Q3B7T1 1238 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 USH1GQ495M9 461 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 IQCEQ6IPM2 695 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 WDR93Q6P2C0 686 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 ZC3H3Q8IXZ2 948 aaKnown RBP18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 NOA1Q8NC60 698 aaKnown RBP18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 TBC1D7Q9P0N9 293 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 ZNF219Q9P2Y4 722 aaPredicted RBP18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 ARFGEF1Q9Y6D6 1849 aa18.25■□□□□ 0.51
CCDC90B-203ENST00000525503 NPHP3-ACAD11A0A0J9YXS1 232 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 SSU72P8A0A1W2PR75 194 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 POTEFA5A3E0 1075 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 POTEIP0CG38 1075 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 AOC3Q16853 763 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 ARSHQ5FYA8 562 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 POTEGQ6S5H5 508 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 POTEEQ6S8J3 1075 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 CATSPER3Q86XQ3 398 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 NELFCDQ8IXH7 590 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 SCFD1Q8WVM8 642 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 UIMC1Q96RL1 719 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 KCTD10Q9H3F6 313 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 SH2D4AQ9H788 454 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 JRKLQ9Y4A0 524 aa18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCDC90B-203ENST00000525503 SNAP25P60880 206 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 KRT26Q7Z3Y9 468 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 TRIM59Q8IWR1 403 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 KCTD17Q8N5Z5 321 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 SYT2Q8N9I0 419 aaPredicted RBP18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 CSRNP1Q96S65 589 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 P2RX7Q99572 595 aaKnown RBP18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 HERC5Q9UII4 1024 aaKnown RBP18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 DUSP10Q9Y6W6 482 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 PIK3CDO00329 1044 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 CETN3O15182 167 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 EIF3JO75822 258 aaKnown RBP18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 CYP3A4P08684 503 aa18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 OAS2P29728 719 aaKnown RBP18.23■□□□□ 0.51
CCDC90B-203ENST00000525503 USP14P54578 494 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms