RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 TGM5O43548 720 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 TUSC2O75896 110 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 RGS9O75916 674 aaPredicted RBP6.49□□□□□ -1.37
USP47-204ENST00000525078 CST3P01034 146 aaPredicted RBP6.49□□□□□ -1.37
USP47-204ENST00000525078 POU2F2P09086 479 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 PEX2P28328 305 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 ADH7P40394 386 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 AFF1P51825 1210 aaKnown RBP6.49□□□□□ -1.37
USP47-204ENST00000525078 ADKP55263 362 aaKnown RBP6.49□□□□□ -1.37
USP47-204ENST00000525078 NLRP12P59046 1061 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 CTBSQ01459 385 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 PPFIA1Q13136 1202 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 ZNF174Q15697 407 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 ZNF468Q5VIY5 522 aaPredicted RBP6.49□□□□□ -1.37
USP47-204ENST00000525078 RNF220Q5VTB9 566 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 TLDC1Q6P9B6 456 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 DENND1CQ8IV53 801 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 ANKRD18AQ8IVF6 992 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 OR2C3Q8N628 320 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 KREMEN2Q8NCW0 462 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 IL17REQ8NFR9 667 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 GTPBP3Q969Y2 492 aaKnown RBP6.49□□□□□ -1.37
USP47-204ENST00000525078 C1GALT1C1Q96EU7 318 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 KREMEN1Q96MU8 473 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP47-204ENST00000525078 NUP62CLQ9H1M0 184 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 TMEM60Q9H2L4 133 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 BHMT2Q9H2M3 363 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 AGO4Q9HCK5 861 aaKnown RBP6.49□□□□□ -1.37
USP47-204ENST00000525078 PDLIM7Q9NR12 457 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 TPCN1Q9ULQ1 816 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 PCDHGC5Q9Y5F6 944 aa6.49□□□□□ -1.37
USP47-204ENST00000525078 M0R3H8 397 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 MAN1A2O60476 641 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 MGEA5O60502 916 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 HIP1RO75146 1068 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 MBD4O95243 580 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 PYGLP06737 847 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 VDRP11473 427 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 ABCB4P21439 1286 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 PPM1AP35813 382 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 CACNB3P54284 484 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 KIF23Q02241 960 aaPredicted RBP6.48□□□□□ -1.37
USP47-204ENST00000525078 G3BP1Q13283 466 aaKnown RBP eCLIP6.48□□□□□ -1.37
USP47-204ENST00000525078 ANO4Q32M45 955 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 UAP1L1Q3KQV9 507 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 CCDC38Q502W7 563 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 CCDC184Q52MB2 194 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 MZT2BQ6NZ67 158 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 LBX2Q6XYB7 198 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 DPP9Q86TI2 863 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 RNF214Q8ND24 703 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 PANK1Q8TE04 598 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 NSUN6Q8TEA1 469 aaKnown RBP6.48□□□□□ -1.37
USP47-204ENST00000525078 NUDT8Q8WV74 236 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 FBXW5Q969U6 566 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 MVB12AQ96EY5 273 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 CERS4Q9HA82 394 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 LGR6Q9HBX8 967 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 KIAA1586Q9HCI6 787 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 SSU72Q9NP77 194 aaKnown RBP6.48□□□□□ -1.37
USP47-204ENST00000525078 TOMM22Q9NS69 142 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 GFOD1Q9NXC2 390 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 GPRC5BQ9NZH0 403 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 GPR52Q9Y2T5 361 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 AFG3L2Q9Y4W6 797 aa6.48□□□□□ -1.37
USP47-204ENST00000525078 THBDP07204 575 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 VSIG8P0DPA2 414 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 LTBRP36941 435 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 PRIM2P49643 509 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 SLBPQ14493 270 aaKnown RBP eCLIP6.47□□□□□ -1.37
USP47-204ENST00000525078 FAAH2Q6GMR7 532 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 FAM180BQ6P0A1 224 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 GIMAP8Q8ND71 665 aaPredicted RBP6.47□□□□□ -1.37
USP47-204ENST00000525078 TTC9Q92623 222 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 TNFRSF25Q93038 417 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 KLHDC7BQ96G42 594 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 LTV1Q96GA3 475 aaPredicted RBP6.47□□□□□ -1.37
USP47-204ENST00000525078 B3GNT5Q9BYG0 378 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 FOXQ1Q9C009 403 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 GPRC5CQ9NQ84 441 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 CATSPERZQ9NTU4 200 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 CEP131Q9UPN4 1083 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 SLC45A1Q9Y2W3 748 aa6.47□□□□□ -1.37
USP47-204ENST00000525078 LOC100289279A0A1B0GTE1 492 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 RHPN2P1A8MT19 583 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 H3BML4 177 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 STXBP3O00186 592 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 TMPRSS2O15393 492 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 KDM1AO60341 852 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 MSCO60682 206 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 DTNBO60941 627 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 RNGTTO60942 597 aaKnown RBP6.46□□□□□ -1.38
USP47-204ENST00000525078 UBXN7O94888 489 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 IFIT1P09914 478 aaKnown RBP6.46□□□□□ -1.38
USP47-204ENST00000525078 SLC9A1P19634 815 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 C5AR1P21730 350 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 TNFSF4P23510 183 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 SMARCA1P28370 1054 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 ZEB1P37275 1124 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms