RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 PKD2L2Q9NZM6 624 aa13.35□□□□□ -0.27
EXTL3-214ENST00000523271 GOLGA8MH3BSY2 632 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 PGRMC1O00264 195 aaKnown RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 UHMK1Q8TAS1 419 aaKnown RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 OTULINQ96BN8 352 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 GUCA1CO95843 209 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 RTCBQ9Y3I0 505 aaKnown RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 PDHA1P08559 390 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 MAP4P27816 1152 aaKnown RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 POLGP54098 1239 aaPredicted RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 EHHADHQ08426 723 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 SNX25Q9H3E2 840 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 MLXIPQ9HAP2 919 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 MAGEF1Q9HAY2 307 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 KPNA7A9QM74 516 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 MYO1DO94832 1006 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 CDH2P19022 906 aaPredicted RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 MYL7Q01449 175 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 HIBCHQ6NVY1 386 aaPredicted RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 HOMEZQ8IX15 550 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 SMYD3Q9H7B4 428 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 CFAP65Q6ZU64 1925 aaKnown RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 GOLGA8TH3BQL2 631 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 GOLGA8HP0CJ92 632 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 NR1H3Q13133 447 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 CUL1Q13616 776 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 ASCC2Q9H1I8 757 aaPredicted RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 ABCF3Q9NUQ8 709 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 TBK1Q9UHD2 729 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 SETD1BQ9UPS6 1966 aaKnown RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 B4E1Z4 1266 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 COPB1P53618 953 aaKnown RBP13.34□□□□□ -0.27
EXTL3-214ENST00000523271 RGS9BPQ6ZS82 235 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 EXOC3L4Q17RC7 722 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 KRT27Q7Z3Y8 459 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 ARHGEF3Q9NR81 526 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 COL4A3BPQ9Y5P4 624 aa13.34□□□□□ -0.27
EXTL3-214ENST00000523271 CFBP00751 764 aa13.33□□□□□ -0.27
EXTL3-214ENST00000523271 IL10P22301 178 aa13.33□□□□□ -0.27
EXTL3-214ENST00000523271 BRD2P25440 801 aaKnown RBP13.33□□□□□ -0.27
EXTL3-214ENST00000523271 KRR1Q13601 381 aaKnown RBP13.33□□□□□ -0.27
EXTL3-214ENST00000523271 FAM47CQ5HY64 1035 aa13.33□□□□□ -0.27
EXTL3-214ENST00000523271 ADCY3O60266 1144 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 SERPINB1P30740 379 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 LAMC2Q13753 1193 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 TFDP1Q14186 410 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 CDR2LQ86X02 465 aaPredicted RBP13.33□□□□□ -0.28
EXTL3-214ENST00000523271 BLOC1S6Q9UL45 172 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 GOLGA8IPA6NC78 632 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 KRT37O76014 449 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 KIF23Q02241 960 aaPredicted RBP13.33□□□□□ -0.28
EXTL3-214ENST00000523271 RBM46Q8TBY0 533 aaKnown RBP13.33□□□□□ -0.28
EXTL3-214ENST00000523271 MYO10Q9HD67 2058 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 ANKRD36BQ8N2N9 1353 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 EIF2S1P05198 315 aaKnown RBP13.33□□□□□ -0.28
EXTL3-214ENST00000523271 NR1D1P20393 614 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 UBE3AQ05086 875 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 PYROXD1Q8WU10 500 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 MESDQ14696 234 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 CNGA2Q16280 664 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 LRRC8AQ8IWT6 810 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 DIS3L2Q8IYB7 885 aaKnown RBP13.33□□□□□ -0.28
EXTL3-214ENST00000523271 EPN1Q9Y6I3 576 aaPredicted RBP13.33□□□□□ -0.28
EXTL3-214ENST00000523271 SMARCA1P28370 1054 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 POLR2FP61218 127 aaKnown RBP13.33□□□□□ -0.28
EXTL3-214ENST00000523271 ALKBH8Q96BT7 664 aaKnown RBP13.33□□□□□ -0.28
EXTL3-214ENST00000523271 THAP11Q96EK4 314 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 EPB41L5Q9HCM4 733 aa13.33□□□□□ -0.28
EXTL3-214ENST00000523271 MTRF1O75570 445 aaKnown RBP13.32□□□□□ -0.28
EXTL3-214ENST00000523271 C16orf62Q7Z3J2 963 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 ZMYND12Q9H0C1 365 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 GCC2Q8IWJ2 1684 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 RASSF7Q02833 373 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 CNGA3Q16281 694 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 FAM160B1Q5W0V3 765 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 ARMCX5Q6P1M9 558 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 PITPNM3Q9BZ71 974 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 NDEL1Q9GZM8 345 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 NSMCE4AQ9NXX6 385 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 C16orf96A6NNT2 1141 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 TRIM69Q86WT6 500 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 PNOCQ13519 176 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 PDIK1LQ8N165 341 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 ASZ1Q8WWH4 475 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 MEIS3Q99687 375 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 RUBCNLQ9H714 662 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 MAGEB5Q9BZ81 275 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 PCDHA12Q9UN75 941 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 CHUKO15111 745 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 ANXA13P27216 316 aa13.32□□□□□ -0.28
EXTL3-214ENST00000523271 COPS6Q7L5N1 327 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms