RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 CTNND2Q9UQB3 1225 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 PARNO95453 639 aaKnown RBP11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 USP17L8P0C7I0 530 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 GPS2Q13227 327 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 GRB10Q13322 594 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 ACTRT1Q8TDG2 376 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 NHEJ1Q9H9Q4 299 aaPredicted RBP11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 SLC12A6Q9UHW9 1150 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 ZNF652Q9Y2D9 606 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 FNDC1Q4ZHG4 1894 aaPredicted RBP11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 AFF2P51816 1311 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 AFMP43652 599 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 GNAQP50148 359 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 CATIPQ7Z7H3 387 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 CFAP61Q8NHU2 1237 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 SLC30A5Q8TAD4 765 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 STAMQ92783 540 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 RTFDC1Q9BY42 306 aaPredicted RBP11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 RIC8AQ9NPQ8 531 aa11.53□□□□□ -0.56
ERGIC1-211ENST00000523215 PITPNM2Q9BZ72 1349 aa11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 ATP2B1P20020 1258 aa11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 SPIRE1Q08AE8 756 aa11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 FILIP1LQ4L180 1135 aa11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 CCDC24Q8N4L8 307 aa11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 ZCCHC17Q9NP64 241 aaKnown RBP11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 GNL3LQ9NVN8 582 aaKnown RBP11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 CWC15Q9P013 229 aaKnown RBP11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 SUFUQ9UMX1 484 aa11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 ARIH1Q9Y4X5 557 aaPredicted RBP11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 PCDHA3Q9Y5H8 950 aa11.52□□□□□ -0.56
ERGIC1-211ENST00000523215 ZNF236Q9UL36 1845 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 TLR2O60603 784 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 PPFIA1Q13136 1202 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 NAB2Q15742 525 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 TTMPQ5BVD1 217 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 PDXDC1Q6P996 788 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 FAM114A1Q8IWE2 563 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 VTI1AQ96AJ9 217 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 TMEM60Q9H2L4 133 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 RASSF4Q9H2L5 321 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 TCP1P17987 556 aaKnown RBP11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 EPHB4P54760 987 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 RPS8P62241 208 aaKnown RBP11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 CAVIN4Q5BKX8 364 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 WLSQ5T9L3 541 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 MFSD4BQ5TF39 518 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 SELENOOQ9BVL4 669 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 FAM107BQ9H098 131 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 KCNMB3Q9NPA1 279 aa11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 TPX2Q9ULW0 747 aaKnown RBP11.52□□□□□ -0.57
ERGIC1-211ENST00000523215 RASA3Q14644 834 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 EDRF1Q3B7T1 1238 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 ANKRD40Q6AI12 368 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 PIK3AP1Q6ZUJ8 805 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 TRIM59Q8IWR1 403 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 DYNLL2Q96FJ2 89 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 FAM129AQ9BZQ8 928 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 BLZF1Q9H2G9 400 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 STX17P56962 302 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 ZNF569Q5MCW4 686 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 PPFIBP1Q86W92 1011 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 OGFOD1Q8N543 542 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 KLHL23Q8NBE8 558 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 SH3RF3Q8TEJ3 882 aaPredicted RBP11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 SALL4Q9UJQ4 1053 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 JAG2Q9Y219 1238 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 PCDHGA4Q9Y5G9 962 aa11.51□□□□□ -0.57
ERGIC1-211ENST00000523215 GPR75-ASB3A0A0A6YYF3 556 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 RNF40O75150 1001 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 RASA1P20936 1047 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 FLT3P36888 993 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 VWA3BQ502W6 1294 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 WDR78Q5VTH9 848 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 NEK11Q8NG66 645 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 NEDD1Q8NHV4 660 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 GPKOWQ92917 476 aaPredicted RBP eCLIP11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 ECEL1O95672 775 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 CDC25AP30304 524 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 HIBADHP31937 336 aaKnown RBP11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 IRAK1P51617 712 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 BYSLQ13895 437 aaKnown RBP11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 NFIXQ14938 502 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 PPP4R3CPQ6ZMV5 832 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 PACS2Q86VP3 889 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 RETREG1Q9H6L5 497 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 CEP72Q9P209 647 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 RASSF9O75901 435 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 MTA2O94776 668 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 TFRCP02786 760 aaKnown RBP11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 MUTP22033 750 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 ITGB3BPQ13352 177 aaPredicted RBP11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 BICDL1Q6ZP65 573 aa11.5□□□□□ -0.57
ERGIC1-211ENST00000523215 TTC30AQ86WT1 665 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms