RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 BCS1LQ9Y276 419 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 RABGAP1Q9Y3P9 1069 aa9.36□□□□□ -0.91
HMGB4-203ENST00000519684 SHTN1A0MZ66 631 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 ERVK-24P63145 666 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 SETQ01105 290 aaPredicted RBP9.35□□□□□ -0.91
HMGB4-203ENST00000519684 TMEM132AQ24JP5 1023 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 KIF4BQ2VIQ3 1234 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 CCDC40Q4G0X9 1142 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 MIIPQ5JXC2 388 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 LRCH2Q5VUJ6 765 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 MNS1Q8NEH6 495 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 ERGIC2Q96RQ1 377 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 DNAJC7Q99615 494 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 GLIS2Q9BZE0 524 aaPredicted RBP9.35□□□□□ -0.91
HMGB4-203ENST00000519684 MRPL44Q9H9J2 332 aaKnown RBP9.35□□□□□ -0.91
HMGB4-203ENST00000519684 LZTFL1Q9NQ48 299 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 FBXO28Q9NVF7 368 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 TBC1D7Q9P0N9 293 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 CTDP1Q9Y5B0 961 aaPredicted RBP9.35□□□□□ -0.91
HMGB4-203ENST00000519684 GJA3Q9Y6H8 435 aa9.35□□□□□ -0.91
HMGB4-203ENST00000519684 IGLV3-22A0A075B6J6 115 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 NPHP3-ACAD11A0A0J9YXS1 232 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 PHF20L1A8MW92 1017 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 TRAF5O00463 557 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 MEIS1O00470 390 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 GNA14O95837 355 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 ICAM1P05362 532 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 GMPSP49915 693 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 ZBED6P86452 979 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 FKBP3Q00688 224 aaKnown RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 RAD51AP2Q09MP3 1159 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 PABPC4Q13310 644 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 CCDC84Q86UT8 332 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 MICALL2Q8IY33 904 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 PDCL2Q8N4E4 241 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 SYT2Q8N9I0 419 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 PRPF38AQ8NAV1 312 aaKnown RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 FBXO41Q8TF61 875 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 CEP63Q96MT8 703 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 EIF2AK1Q9BQI3 630 aaKnown RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 SLF1Q9BQI6 1058 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 NDST4Q9H3R1 872 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 TUFT1Q9NNX1 390 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 CGNQ9P2M7 1197 aaKnown RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 RBBP6Q7Z6E9 1792 aaKnown RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 LTBP3Q9NS15 1303 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 A0A1W2PQJ5 194 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 RNF225M0QZC1 329 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 CTNND1O60716 968 aaKnown RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 GAS7O60861 476 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 TBCAO75347 108 aaKnown RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 SPATA31C1P0DKV0 1188 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 PTGER2P43116 358 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 UBXN2AP68543 259 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 CACNB1Q02641 598 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 CYP4A11Q02928 519 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 FIGNQ5HY92 759 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 DCAF15Q66K64 600 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 PPP4R3CPQ6ZMV5 832 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 KRT26Q7Z3Y9 468 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 MCF2L2Q86YR7 1114 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 NELFCDQ8IXH7 590 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 GLIS3Q8NEA6 775 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 CYP2W1Q8TAV3 490 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 TBC1D5Q92609 795 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 HOOK2Q96ED9 719 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 WDR18Q9BV38 432 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 WDR11Q9BZH6 1224 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 TANGO6Q9C0B7 1094 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 KIAA1683Q9H0B3 1180 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 SCAF8Q9UPN6 1271 aaKnown RBP9.34□□□□□ -0.91
HMGB4-203ENST00000519684 CD2APQ9Y5K6 639 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 COL4A3BPQ9Y5P4 624 aa9.34□□□□□ -0.91
HMGB4-203ENST00000519684 DOCK1Q14185 1865 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 FRMD3A2A2Y4 597 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 CHMP2AO43633 222 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 IPO7O95373 1038 aaKnown RBP9.33□□□□□ -0.92
HMGB4-203ENST00000519684 EYA4O95677 639 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 INPP5BP32019 993 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 CYLC1P35663 651 aaPredicted RBP9.33□□□□□ -0.92
HMGB4-203ENST00000519684 PRELPP51888 382 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 PPP2R5CQ13362 524 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 GIT2Q14161 759 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 TBC1D10BQ4KMP7 808 aaPredicted RBP9.33□□□□□ -0.92
HMGB4-203ENST00000519684 CEP55Q53EZ4 464 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 ARSHQ5FYA8 562 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 LRRC55Q6ZSA7 311 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 ACRBPQ8NEB7 543 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 SLC5A5Q92911 643 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 TEPSINQ96N21 525 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 WDR24Q96S15 920 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 ZNF577Q9BSK1 485 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 TEKT3Q9BXF9 490 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 CNOT7Q9UIV1 285 aaKnown RBP9.33□□□□□ -0.92
HMGB4-203ENST00000519684 PNMA2Q9UL42 364 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 NDUFA10O95299 355 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 KLK7P49862 253 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 PSMC6P62333 389 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 RASSF7Q02833 373 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms