RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 C12orf40Q86WS4 652 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MIB1Q86YT6 1006 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 HID1Q8IV36 788 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 REXO1L1PQ8IX06 675 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LYG1Q8N1E2 194 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LARGE2Q8N3Y3 721 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 D2HGDHQ8N465 521 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LILRA3Q8N6C8 439 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZNF655Q8N720 491 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NETO2Q8NC67 525 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 DAGLBQ8NCG7 672 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CTCFLQ8NI51 663 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 GPR152Q8TDT2 470 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 HASPINQ8TF76 798 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 XAGE3Q8WTP9 111 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 RNF141Q8WVD5 230 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 DPF1Q92782 380 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CAVIN3Q969G5 261 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FAM84BQ96KN1 310 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CLIC6Q96NY7 704 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TCF12Q99081 682 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZIM2Q9NZV7 527 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MCM8Q9UJA3 840 aa-0.11□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MACF1Q9UPN3 7388 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FBN1P35555 2871 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CENPVL1A0A0U1RR11 272 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FAM221BA6H8Z2 402 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MATN2O00339 956 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 EREGO14944 169 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 KLHL18O94889 574 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 DKK1O94907 266 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TOP3BO95985 862 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FUCA1P04066 466 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 RPLP1P05386 114 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SYPP08247 313 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 HKR1P10072 659 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 KELP23276 732 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 RFC5P40937 340 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZAP70P43403 619 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SLC6A11P48066 632 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MAN2A2P49641 1150 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PLCD1P51178 756 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CACNA2D1P54289 1103 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 JAM2P57087 298 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 KRTAP12-4P60329 112 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZNF252P-AS1Q0IIN9 211 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SKIV2LQ15477 1246 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NPY5RQ15761 445 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 BMT2Q1RMZ1 405 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 RNF151Q2KHN1 245 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TIGD2Q4W5G0 525 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 RABL3Q5HYI8 236 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 COX20Q5RI15 118 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 KHDRBS2Q5VWX1 349 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MAP1SQ66K74 1059 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TRMT10BQ6PF06 316 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CD300LDQ6UXZ3 194 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 C15orf39Q6ZRI6 1047 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 Q6ZRM9 215 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 GPR155Q7Z3F1 870 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CABP7Q86V35 215 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NR2C2APQ86WQ0 139 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ANKRD35Q8N283 1001 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LCORLQ8N3X6 602 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 FAM26EQ8N5C1 309 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SPRYD3Q8NCJ5 442 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ZNF485Q8NCK3 441 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NUDT10Q8NFP7 164 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CASKIN2Q8WXE0 1202 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 VTI1AQ96AJ9 217 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NUDT11Q96G61 164 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ACSBG1Q96GR2 724 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TCTN2Q96GX1 697 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SLITRK1Q96PX8 696 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TMEM209Q96SK2 561 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MPHOSPH9Q99550 1183 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NELFAQ9H3P2 528 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SERHL2Q9H4I8 314 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LIN7BQ9HAP6 207 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 KIAA1586Q9HCI6 787 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NGRNQ9NPE2 291 aaKnown RBP-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 NRIP3Q9NQ35 241 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 DKK2Q9UBU2 259 aa-0.12□□□□□ -2.43
RNU6-1238P-201ENST00000517215 A0A1B0GU03 582 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TMEM129A0AVI4 362 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 MANSC4A6NHS7 340 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PHGR1C9JFL3 82 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PIK3CDO00329 1044 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TRAFD1O14545 582 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 LRRN2O75325 713 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 ESRRBO95718 433 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PRB2P02812 416 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PRKCGP05129 697 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 DNAH10OSP0CZ25 163 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SCP2P22307 547 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 SFPQP23246 707 aaKnown RBP eCLIP-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 TACR1P25103 407 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 PLA2G5P39877 138 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 CSRP3P50461 194 aa-0.13□□□□□ -2.43
RNU6-1238P-201ENST00000517215 BLOC1S1P78537 153 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms