RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 SLC10A6Q3KNW5 377 aa6.35□□□□□ -1.39
LINC01088-211ENST00000515597 TRMT10BQ6PF06 316 aaKnown RBP6.35□□□□□ -1.39
LINC01088-211ENST00000515597 KBTBD2Q8IY47 623 aa6.35□□□□□ -1.39
LINC01088-211ENST00000515597 SH3RF3Q8TEJ3 882 aaPredicted RBP6.35□□□□□ -1.39
LINC01088-211ENST00000515597 KISS1RQ969F8 398 aaPredicted RBP6.35□□□□□ -1.39
LINC01088-211ENST00000515597 TMEM209Q96SK2 561 aa6.35□□□□□ -1.39
LINC01088-211ENST00000515597 NPEPPSL1A6NEC2 478 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 GPR42O15529 346 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 MSCO60682 206 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 GRIN1Q05586 938 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 PKN3Q6P5Z2 889 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 SLC16A11Q8NCK7 471 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 PTPN18Q99952 460 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 JAM3Q9BX67 310 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 CDIP1Q9H305 208 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 PODXL2Q9NZ53 605 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 ASH2LQ9UBL3 628 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 FTSJ1Q9UET6 329 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 NPFFR2Q9Y5X5 522 aa6.34□□□□□ -1.39
LINC01088-211ENST00000515597 E9PSI1 815 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 CAPNS1P04632 268 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 C6P13671 934 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 PPP2R2AP63151 447 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 PROSER1Q86XN7 944 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 RBM12BQ8IXT5 1001 aaKnown RBP6.33□□□□□ -1.4
LINC01088-211ENST00000515597 PIP4K2CQ8TBX8 421 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 PHOSPHO1Q8TCT1 267 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 WRNIP1Q96S55 665 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 IER2Q9BTL4 223 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 SCAND2PQ9GZW5 306 aaPredicted RBP6.33□□□□□ -1.4
LINC01088-211ENST00000515597 EPN3Q9H201 632 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 SMOC1Q9H4F8 434 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 CD248Q9HCU0 757 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 JADE2Q9NQC1 790 aa6.33□□□□□ -1.4
LINC01088-211ENST00000515597 SLC27A2O14975 620 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 COL6A1P12109 1028 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 EPHB4P54760 987 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 PPP2CBP62714 309 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 PPP2CAP67775 309 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 ARHGEF18Q6ZSZ5 1173 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 USP53Q70EK8 1073 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 EEPD1Q7L9B9 569 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 CIR1Q86X95 450 aaPredicted RBP6.32□□□□□ -1.4
LINC01088-211ENST00000515597 PALM2Q8IXS6 379 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 KLHL36Q8N4N3 616 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 NUDT10Q8NFP7 164 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 HNRNPLLQ8WVV9 542 aaKnown RBP6.32□□□□□ -1.4
LINC01088-211ENST00000515597 KCTD13Q8WZ19 329 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 NUDT11Q96G61 164 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 KLC2Q9H0B6 622 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 SRRDQ9UH36 339 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 TSC22D4Q9Y3Q8 395 aa6.32□□□□□ -1.4
LINC01088-211ENST00000515597 A0A1W2PQU0 124 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 AGRPO00253 132 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 KLF4O43474 513 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 B4GALT4O60513 344 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 CYP7B1O75881 506 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 MAP4K2Q12851 820 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 NFATC3Q12968 1075 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 ZNF585AQ6P3V2 769 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 ANKS3Q6ZW76 656 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 CELF2-AS1Q8N7Q2 184 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 PHF20Q9BVI0 1012 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 ZDHHC9Q9Y397 364 aa6.31□□□□□ -1.4
LINC01088-211ENST00000515597 KRIT1O00522 736 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 DLX3O60479 287 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 MAFKO60675 156 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 LTFP02788 710 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 TACR2P21452 398 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 VASNQ6EMK4 673 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 Q8N1X5 172 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 DNERQ8NFT8 737 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 CLEC4DQ8WXI8 215 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 MEGF9Q9H1U4 602 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 BARX1Q9HBU1 254 aaPredicted RBP6.3□□□□□ -1.4
LINC01088-211ENST00000515597 SLC6A20Q9NP91 592 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 ST7Q9NRC1 585 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 GPR27Q9NS67 375 aa6.3□□□□□ -1.4
LINC01088-211ENST00000515597 R3HCC1Q9Y3T6 440 aaKnown RBP6.3□□□□□ -1.4
LINC01088-211ENST00000515597 COL6A2P12110 1019 aa6.29□□□□□ -1.4
LINC01088-211ENST00000515597 ZC3H6P61129 1189 aaKnown RBP6.29□□□□□ -1.4
LINC01088-211ENST00000515597 DDR2Q16832 855 aa6.29□□□□□ -1.4
LINC01088-211ENST00000515597 CYP4F22Q6NT55 531 aa6.29□□□□□ -1.4
LINC01088-211ENST00000515597 DTX3Q8N9I9 347 aa6.29□□□□□ -1.4
LINC01088-211ENST00000515597 TTLL11Q8NHH1 800 aa6.29□□□□□ -1.4
LINC01088-211ENST00000515597 DEF6Q9H4E7 631 aa6.29□□□□□ -1.4
LINC01088-211ENST00000515597 KLHL18O94889 574 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 GLRBP48167 497 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 TUSC3Q13454 348 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 SLFN13Q68D06 897 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 KCNT2Q6UVM3 1135 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 WWC2-AS2Q96NR7 200 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 KCNJ15Q99712 375 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 DLL4Q9NR61 685 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 HSPBP1Q9NZL4 362 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 ZFP69BQ9UJL9 534 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 ADAM29Q9UKF5 820 aa6.28□□□□□ -1.4
LINC01088-211ENST00000515597 CNOT4O95628 575 aaKnown RBP6.27□□□□□ -1.41
LINC01088-211ENST00000515597 SELENOPP49908 381 aa6.27□□□□□ -1.41
LINC01088-211ENST00000515597 PAN2Q504Q3 1202 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms