RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 SLC39A2Q9NP94 309 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 INIPQ9NRY2 104 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 ATP8A2Q9NTI2 1148 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 SNCAIPQ9Y6H5 919 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 PIK3C2GO75747 1445 aa7.94□□□□□ -1.14
NIPBL-208ENST00000514335 GOLGA8IPA6NC78 632 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 CASQ2O14958 399 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-208ENST00000514335 OLFM2O95897 454 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 MAP3K9P80192 1104 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 BYSLQ13895 437 aaKnown RBP7.93□□□□□ -1.14
NIPBL-208ENST00000514335 C6orf132Q5T0Z8 1188 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 RBM20Q5T481 1227 aaKnown RBP7.93□□□□□ -1.14
NIPBL-208ENST00000514335 GKAP1Q5VSY0 366 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-208ENST00000514335 METTL16Q86W50 562 aaKnown RBP7.93□□□□□ -1.14
NIPBL-208ENST00000514335 DDX42Q86XP3 938 aaKnown RBP eCLIP7.93□□□□□ -1.14
NIPBL-208ENST00000514335 IFNL1Q8IU54 200 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 SPICE1Q8N0Z3 855 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 SYT2Q8N9I0 419 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-208ENST00000514335 DDX11Q96FC9 970 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 ABHD8Q96I13 439 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 CABS1Q96KC9 395 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 CLK4Q9HAZ1 481 aaKnown RBP7.93□□□□□ -1.14
NIPBL-208ENST00000514335 ITGB1BP2Q9UKP3 347 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 EXOC7Q9UPT5 735 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 CCDC61Q9Y6R9 512 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 DHX57Q6P158 1386 aaKnown RBP7.93□□□□□ -1.14
NIPBL-208ENST00000514335 LOC105371267A0A1B0GV96 52 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 SUPT3HO75486 399 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 TIPRLO75663 272 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 NEK3P51956 506 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 BPIFB4P59827 614 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 KRT83P78385 493 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 LRRC74AQ0VAA2 488 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 STK3Q13188 491 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 SLFNL1Q499Z3 407 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 ALFQ53S48 1182 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 FBXO33Q7Z6M2 555 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 PPP1R14CQ8TAE6 165 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 ZFAND2BQ8WV99 257 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 COG3Q96JB2 828 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 FAM161BQ96MY7 647 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 SERHL2Q9H4I8 314 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 LNPEPQ9UIQ6 1025 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 TMX2Q9Y320 296 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 CPDO75976 1380 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 NRKQ7Z2Y5 1582 aa7.93□□□□□ -1.14
NIPBL-208ENST00000514335 CYP2D7A0A087X1C5 515 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 AP3B1O00203 1094 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 RASGRP1O95267 797 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 TROVE2P10155 538 aaKnown RBP eCLIP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 EIF2S2P20042 333 aaKnown RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 PRKACBP22694 351 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 LIMK1P53667 647 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 TCIRG1Q13488 830 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 MOGSQ13724 837 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 LAMC2Q13753 1193 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 NFE2Q16621 373 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 PABPC1LQ4VXU2 614 aaKnown RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 GALNT15Q8N3T1 639 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 GFM2Q969S9 779 aaKnown RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 CD93Q9NPY3 652 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 CYLDQ9NQC7 956 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 MOCS1Q9NZB8 636 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 IL1RAPL1Q9NZN1 696 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 HMGXB4Q9UGU5 601 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 ZNF536O15090 1300 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 SLC12A8A0AV02 714 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 PALM3A6NDB9 673 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 TMCC2O75069 709 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 IDO1P14902 403 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 PLCG2P16885 1265 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 GUCY1A2P33402 732 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 SARSP49591 514 aaKnown RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 MRPS5P82675 430 aaKnown RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 RELQ04864 619 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 SSPNQ14714 243 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 SKOR2Q2VWA4 1001 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 MTERF2Q49AM1 385 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 SLC27A3Q5K4L6 730 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 TWF2Q6IBS0 349 aaKnown RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 CPXCR1Q8N123 301 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 ARHGAP18Q8N392 663 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 NKAIN3Q8N8D7 197 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 SPATA5Q8NB90 893 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 BBOF1Q8ND07 529 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 TRIM58Q8NG06 486 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 HNRNPABQ99729 332 aaKnown RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 CARD11Q9BXL7 1154 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 PLCB1Q9NQ66 1216 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 VTI1BQ9UEU0 232 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 STRIP2Q9ULQ0 834 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 GUCA1CO95843 209 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 GSTM4Q03013 218 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 LMNB2Q03252 620 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 KRT71Q3SY84 523 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 CFAP157Q5JU67 520 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 INTS3Q68E01 1043 aaKnown RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 NEPROQ6NW34 567 aa7.92□□□□□ -1.14
NIPBL-208ENST00000514335 TRMT2BQ96GJ1 504 aaKnown RBP7.92□□□□□ -1.14
NIPBL-208ENST00000514335 ERP44Q9BS26 406 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms