RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 HOXB8P17481 243 aaPredicted RBP9.2□□□□□ -0.94
CLDND1-229ENST00000513988 BTG3Q14201 252 aaPredicted RBP9.2□□□□□ -0.94
CLDND1-229ENST00000513988 IL31Q6EBC2 164 aa9.2□□□□□ -0.94
CLDND1-229ENST00000513988 CES5AQ6NT32 575 aa9.2□□□□□ -0.94
CLDND1-229ENST00000513988 SYCE2Q6PIF2 218 aa9.2□□□□□ -0.94
CLDND1-229ENST00000513988 ZNF462Q96JM2 2506 aa9.2□□□□□ -0.94
CLDND1-229ENST00000513988 NAV1Q8NEY1 1877 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 RSPH10B2B2RC85 870 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 RSPH10BP0C881 870 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 GABPAQ06546 454 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 SPEM2Q0P670 501 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 TDGQ13569 410 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 DUSP6Q16828 381 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 TRIM71Q2Q1W2 868 aaKnown RBP9.19□□□□□ -0.94
CLDND1-229ENST00000513988 ZNF528Q3MIS6 628 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 PRPF38AQ8NAV1 312 aaKnown RBP9.19□□□□□ -0.94
CLDND1-229ENST00000513988 KLHL23Q8NBE8 558 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 OXER1Q8TDS5 423 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 ZCCHC14Q8WYQ9 949 aaKnown RBP9.19□□□□□ -0.94
CLDND1-229ENST00000513988 NEUROD6Q96NK8 337 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 HNRNPABQ99729 332 aaKnown RBP9.19□□□□□ -0.94
CLDND1-229ENST00000513988 EPC1Q9H2F5 836 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 ACAD9Q9H845 621 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 A1CFQ9NQ94 594 aaKnown RBP9.19□□□□□ -0.94
CLDND1-229ENST00000513988 GTF2IRD1Q9UHL9 959 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 CDH22Q9UJ99 828 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 DUSP12Q9UNI6 340 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 AKAP2Q9Y2D5 859 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 PCDHGA2Q9Y5H1 932 aa9.19□□□□□ -0.94
CLDND1-229ENST00000513988 TBC1D4O60343 1298 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 EEF2P13639 858 aaKnown RBP9.18□□□□□ -0.94
CLDND1-229ENST00000513988 ARID4AP29374 1257 aaPredicted RBP9.18□□□□□ -0.94
CLDND1-229ENST00000513988 PSEN2P49810 448 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 PPP2R5BQ15173 497 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 TPRNQ4KMQ1 711 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 TMEM184AQ6ZMB5 413 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 CERS3Q8IU89 383 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 C7orf31Q8N865 590 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 MIGA1Q8NAN2 632 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 ADAM32Q8TC27 787 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 WNT8BQ93098 351 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 NUP88Q99567 741 aaPredicted RBP9.18□□□□□ -0.94
CLDND1-229ENST00000513988 TBC1D17Q9HA65 648 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 SIT1Q9Y3P8 196 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 AKAP13Q12802 2813 aa9.18□□□□□ -0.94
CLDND1-229ENST00000513988 NKRFO15226 690 aaKnown RBP eCLIP9.17□□□□□ -0.94
CLDND1-229ENST00000513988 AKR1B1P15121 316 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 CYP7A1P22680 504 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 THPOP40225 353 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 MTHFRP42898 656 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 PDE4BQ07343 736 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 DMRTA1Q5VZB9 504 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 LLGL2Q6P1M3 1020 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 MAML2Q8IZL2 1156 aaPredicted RBP9.17□□□□□ -0.94
CLDND1-229ENST00000513988 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 LARP6Q9BRS8 491 aaKnown RBP9.17□□□□□ -0.94
CLDND1-229ENST00000513988 RC3H2Q9HBD1 1191 aaKnown RBP9.17□□□□□ -0.94
CLDND1-229ENST00000513988 SLC38A10Q9HBR0 1119 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 CYP26B1Q9NR63 512 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 DLGAP2Q9P1A6 1054 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 HDAC6Q9UBN7 1215 aa9.17□□□□□ -0.94
CLDND1-229ENST00000513988 MYH8P13535 1937 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 RBM47A0AV96 593 aaKnown RBP9.16□□□□□ -0.94
CLDND1-229ENST00000513988 KRBA1A5PL33 1030 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 LAMTOR5O43504 91 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 PPFIA3O75145 1194 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 VAMP4O75379 141 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 CFHP08603 1231 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 UQCRFS1P1P0C7P4 283 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 OAZ1P54368 228 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 ITIH3Q06033 890 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 APBB2Q92870 758 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 ADAM7Q9H2U9 754 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 RNF146Q9NTX7 359 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 WNT16Q9UBV4 365 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 FBXO4Q9UKT5 387 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 RAB23Q9ULC3 237 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 CA14Q9ULX7 337 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 PA2G4Q9UQ80 394 aaKnown RBP9.16□□□□□ -0.94
CLDND1-229ENST00000513988 USTQ9Y2C2 406 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 MRPL42Q9Y6G3 142 aaKnown RBP9.16□□□□□ -0.94
CLDND1-229ENST00000513988 SPTA1P02549 2419 aa9.16□□□□□ -0.94
CLDND1-229ENST00000513988 TEP1Q99973 2627 aaKnown RBP9.16□□□□□ -0.94
CLDND1-229ENST00000513988 WDFY3Q8IZQ1 3526 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 GDF9O60383 454 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 LRP3O75074 770 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 PDE4AP27815 886 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 CSTF1Q05048 431 aaKnown RBP9.15□□□□□ -0.94
CLDND1-229ENST00000513988 KCNC3Q14003 757 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 RUFY4Q6ZNE9 571 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 PRR23CQ6ZRP0 262 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 PDZD3Q86UT5 571 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 LRRC47Q8N1G4 583 aaKnown RBP9.15□□□□□ -0.94
CLDND1-229ENST00000513988 ZBTB44Q8NCP5 570 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 MORC4Q8TE76 937 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 COPS5Q92905 334 aa9.15□□□□□ -0.94
CLDND1-229ENST00000513988 ACSF2Q96CM8 615 aaPredicted RBP9.15□□□□□ -0.94
CLDND1-229ENST00000513988 ZNF689Q96CS4 500 aaPredicted RBP9.15□□□□□ -0.94
CLDND1-229ENST00000513988 ALG1Q9BT22 464 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms