RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 MEIS3Q99687 375 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 TMPRSS13Q9BYE2 586 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 MRPL18Q9H0U6 180 aaKnown RBP7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 SIL1Q9H173 461 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 DEFB129Q9H1M3 183 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 R3HDMLQ9H3Y0 253 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 HDAC9Q9UKV0 1011 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 PA2G4Q9UQ80 394 aaKnown RBP7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 POLR3KQ9Y2Y1 108 aaPredicted RBP7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 LRRFIP2Q9Y608 721 aaKnown RBP7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 MRVI1Q9Y6F6 885 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 PHIPQ8WWQ0 1821 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 MROH5Q6ZUA9 1318 aa7.93□□□□□ -1.14
HMGN1P17-201ENST00000513734 FOCADQ5VW36 1801 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 BCAR3O75815 825 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 CACNB3P54284 484 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 INSM1Q01101 510 aaPredicted RBP7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 ID3Q02535 119 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 CLCQ05315 142 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 NBPF12Q5TAG4 269 aaPredicted RBP7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 APOBEC3FQ8IUX4 373 aaKnown RBP7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 REXO1Q8N1G1 1221 aaKnown RBP7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 SRRTQ9BXP5 876 aaKnown RBP7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 MCOLN1Q9GZU1 580 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 RNF208Q9H0X6 261 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 TDRD3Q9H7E2 651 aaKnown RBP7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 VEZTQ9HBM0 779 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 ZNF70Q9UC06 446 aaPredicted RBP7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 PPP1R9AQ9ULJ8 1098 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 STRIP2Q9ULQ0 834 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 ANGEL1Q9UNK9 670 aaKnown RBP7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 PCDHB14Q9Y5E9 798 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 SIPA1L1O43166 1804 aa7.92□□□□□ -1.14
HMGN1P17-201ENST00000513734 KIAA0100Q14667 2235 aaKnown RBP7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 PRAMEF27A3QJZ7 478 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 MEGF11A6BM72 1044 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 TCP10L2B9ZVM9 353 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 EYA2O00167 538 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 STK10O94804 968 aaKnown RBP7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 PDE8BO95263 885 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 TBC1D8O95759 1140 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 UBTFL1P0CB47 393 aaPredicted RBP7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 ADORA1P30542 326 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 RBM5P52756 815 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 FKBP1AP62942 108 aaKnown RBP7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 AGGF1Q8N302 714 aaeCLIP7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 ARMC5Q96C12 935 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 TEPSINQ96N21 525 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 CYP4F12Q9HCS2 524 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 PICK1Q9NRD5 415 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 PCDHGC5Q9Y5F6 944 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 CORINQ9Y5Q5 1042 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 MAST2Q6P0Q8 1798 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 MGAMO43451 1857 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 DOCK3Q8IZD9 2030 aa7.91□□□□□ -1.14
HMGN1P17-201ENST00000513734 DOCK1Q14185 1865 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 SYNGAP1Q96PV0 1343 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 CCDC85CA6NKD9 419 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 CA12O43570 354 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 SPATA31C1P0DKV0 1188 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 TRIM27P14373 513 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 FKBP1BP68106 108 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 RASA3Q14644 834 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 PUM3Q15397 648 aaKnown RBP7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 CYFIP1Q7L576 1253 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 DZIP1LQ8IYY4 767 aaKnown RBP7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 C12orf50Q8NA57 414 aaPredicted RBP7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 SCARF2Q96GP6 870 aaPredicted RBP7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 CRBNQ96SW2 442 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 TMEM39BQ9GZU3 492 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 EHMT1Q9H9B1 1298 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 AP4E1Q9UPM8 1137 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 HIF3AQ9Y2N7 669 aa7.9□□□□□ -1.14
HMGN1P17-201ENST00000513734 F8W735 103 aaPredicted RBP7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 TMPRSS2O15393 492 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 USP2O75604 605 aaPredicted RBP7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 ALX3O95076 343 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 DRD2P14416 443 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 NF2P35240 595 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 ETFBP38117 255 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 PHKA1P46020 1223 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 CAP1Q01518 475 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 PPM1JQ5JR12 505 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 INTS3Q68E01 1043 aaKnown RBP7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 FDX2Q6P4F2 183 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 ARMC9Q7Z3E5 817 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 SMG8Q8ND04 991 aaKnown RBP7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 WNK4Q96J92 1243 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 SUGCTQ9HAC7 445 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 SAGE1Q9NXZ1 904 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 CRIM1Q9NZV1 1036 aa7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 RBBP6Q7Z6E9 1792 aaKnown RBP7.89□□□□□ -1.15
HMGN1P17-201ENST00000513734 MYH1P12882 1939 aa7.88□□□□□ -1.15
HMGN1P17-201ENST00000513734 IGF2BP3O00425 579 aaKnown RBP eCLIP7.88□□□□□ -1.15
HMGN1P17-201ENST00000513734 ATE1O95260 518 aa7.88□□□□□ -1.15
HMGN1P17-201ENST00000513734 HTR3BO95264 441 aa7.88□□□□□ -1.15
HMGN1P17-201ENST00000513734 CT47B1P0C2W7 299 aaPredicted RBP7.88□□□□□ -1.15
HMGN1P17-201ENST00000513734 ADH5P11766 374 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms