RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 ACTRT1Q8TDG2 376 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 P3H4Q92791 437 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 CELF1Q92879 486 aaKnown RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 NT5C3AQ9H0P0 336 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 PLEKHA4Q9H4M7 779 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 TAF1DQ9H5J8 278 aaPredicted RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 ACTR5Q9H9F9 607 aaPredicted RBP10.01□□□□□ -0.81
SNF8-210ENST00000511214 EPB41L5Q9HCM4 733 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 INTUQ9ULD6 942 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 LEMD3Q9Y2U8 911 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 COL24A1Q17RW2 1714 aa10.01□□□□□ -0.81
SNF8-210ENST00000511214 A0A0A6YYK5 440 aaPredicted RBP10□□□□□ -0.81
SNF8-210ENST00000511214 USP17L3A6NCW0 530 aa10□□□□□ -0.81
SNF8-210ENST00000511214 USP17L4A6NCW7 530 aa10□□□□□ -0.81
SNF8-210ENST00000511214 NCK2O43639 380 aa10□□□□□ -0.81
SNF8-210ENST00000511214 PALMO75781 387 aa10□□□□□ -0.81
SNF8-210ENST00000511214 GFPT2O94808 682 aa10□□□□□ -0.81
SNF8-210ENST00000511214 NOL4O94818 638 aa10□□□□□ -0.81
SNF8-210ENST00000511214 FAM107AO95990 144 aa10□□□□□ -0.81
SNF8-210ENST00000511214 GLI1P08151 1106 aa10□□□□□ -0.81
SNF8-210ENST00000511214 HNRNPH1P31943 449 aaKnown RBP10□□□□□ -0.81
SNF8-210ENST00000511214 MDH1P40925 334 aaKnown RBP10□□□□□ -0.81
SNF8-210ENST00000511214 MATR3P43243 847 aaKnown RBP eCLIP10□□□□□ -0.81
SNF8-210ENST00000511214 FNTAP49354 379 aa10□□□□□ -0.81
SNF8-210ENST00000511214 CARSP49589 748 aaKnown RBP10□□□□□ -0.81
SNF8-210ENST00000511214 LIG3P49916 1009 aa10□□□□□ -0.81
SNF8-210ENST00000511214 USP11P51784 963 aa10□□□□□ -0.81
SNF8-210ENST00000511214 ADCY7P51828 1080 aa10□□□□□ -0.81
SNF8-210ENST00000511214 SLC7A5Q01650 507 aa10□□□□□ -0.81
SNF8-210ENST00000511214 GUCY2DQ02846 1103 aa10□□□□□ -0.81
SNF8-210ENST00000511214 EVX2Q03828 476 aa10□□□□□ -0.81
SNF8-210ENST00000511214 ASIC2Q16515 512 aa10□□□□□ -0.81
SNF8-210ENST00000511214 CCDC40Q4G0X9 1142 aa10□□□□□ -0.81
SNF8-210ENST00000511214 ASPRV1Q53RT3 343 aa10□□□□□ -0.81
SNF8-210ENST00000511214 TDRD12Q587J7 1177 aaKnown RBP10□□□□□ -0.81
SNF8-210ENST00000511214 AGBL2Q5U5Z8 902 aa10□□□□□ -0.81
SNF8-210ENST00000511214 NAA35Q5VZE5 725 aa10□□□□□ -0.81
SNF8-210ENST00000511214 C3orf67Q6ZVT6 689 aa10□□□□□ -0.81
SNF8-210ENST00000511214 USP17L1Q7RTZ2 530 aa10□□□□□ -0.81
SNF8-210ENST00000511214 CCDC65Q8IXS2 484 aa10□□□□□ -0.81
SNF8-210ENST00000511214 USP38Q8NB14 1042 aa10□□□□□ -0.81
SNF8-210ENST00000511214 SCFD2Q8WU76 684 aa10□□□□□ -0.81
SNF8-210ENST00000511214 LMBR1Q8WVP7 490 aa10□□□□□ -0.81
SNF8-210ENST00000511214 CASKIN2Q8WXE0 1202 aa10□□□□□ -0.81
SNF8-210ENST00000511214 PIK3R5Q8WYR1 880 aa10□□□□□ -0.81
SNF8-210ENST00000511214 DDX12PQ92771 950 aa10□□□□□ -0.81
SNF8-210ENST00000511214 DNAJC19Q96DA6 116 aa10□□□□□ -0.81
SNF8-210ENST00000511214 ZFP91Q96JP5 570 aaPredicted RBP10□□□□□ -0.81
SNF8-210ENST00000511214 CABS1Q96KC9 395 aa10□□□□□ -0.81
SNF8-210ENST00000511214 DRC1Q96MC2 740 aa10□□□□□ -0.81
SNF8-210ENST00000511214 NLRP3Q96P20 1036 aa10□□□□□ -0.81
SNF8-210ENST00000511214 NCAPGQ9BPX3 1015 aa10□□□□□ -0.81
SNF8-210ENST00000511214 GLT8D2Q9H1C3 349 aa10□□□□□ -0.81
SNF8-210ENST00000511214 TMBIM4Q9HC24 238 aa10□□□□□ -0.81
SNF8-210ENST00000511214 SALL4Q9UJQ4 1053 aa10□□□□□ -0.81
SNF8-210ENST00000511214 FBXL5Q9UKA1 691 aa10□□□□□ -0.81
SNF8-210ENST00000511214 NFU1Q9UMS0 254 aa10□□□□□ -0.81
SNF8-210ENST00000511214 STK24Q9Y6E0 443 aa10□□□□□ -0.81
SNF8-210ENST00000511214 CNTNAP4Q9C0A0 1308 aa10□□□□□ -0.81
SNF8-210ENST00000511214 SNED1Q8TER0 1413 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 DDX60LQ5H9U9 1706 aaKnown RBP9.99□□□□□ -0.81
SNF8-210ENST00000511214 TLR2O60603 784 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 PAEPP09466 180 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 CXCR5P32302 372 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 TXKP42681 527 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 NPEPPSP55786 919 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 GSCP56915 257 aaPredicted RBP9.99□□□□□ -0.81
SNF8-210ENST00000511214 COASYQ13057 564 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 ITGB3BPQ13352 177 aaPredicted RBP9.99□□□□□ -0.81
SNF8-210ENST00000511214 PDCLQ13371 301 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 RPS6KA1Q15418 735 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 CLUL1Q15846 466 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 PPP2R5EQ16537 467 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 FAM26FQ5R3K3 315 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 NLRP14Q86W24 1093 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 SH3RF3Q8TEJ3 882 aaPredicted RBP9.99□□□□□ -0.81
SNF8-210ENST00000511214 SNX29Q8TEQ0 813 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 ZNF473Q8WTR7 871 aaKnown RBP9.99□□□□□ -0.81
SNF8-210ENST00000511214 KAT2BQ92831 832 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 DYNLL2Q96FJ2 89 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 RNPC3Q96LT9 517 aaKnown RBP9.99□□□□□ -0.81
SNF8-210ENST00000511214 MYCBPQ99417 103 aaPredicted RBP9.99□□□□□ -0.81
SNF8-210ENST00000511214 EYA3Q99504 573 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 MXD3Q9BW11 206 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 LSM14BQ9BX40 385 aaKnown RBP9.99□□□□□ -0.81
SNF8-210ENST00000511214 TANGO6Q9C0B7 1094 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 GANQ9H2C0 597 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 SLITRK6Q9H5Y7 841 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 SWAP70Q9UH65 585 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 STX8Q9UNK0 236 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 DAAM1Q9Y4D1 1078 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.99□□□□□ -0.81
SNF8-210ENST00000511214 PITPNM2Q9BZ72 1349 aa9.99□□□□□ -0.81
SNF8-210ENST00000511214 MYH14Q7Z406 1995 aaKnown RBP9.99□□□□□ -0.81
SNF8-210ENST00000511214 COL16A1Q07092 1604 aaPredicted RBP9.98□□□□□ -0.81
SNF8-210ENST00000511214 FRMD3A2A2Y4 597 aa9.98□□□□□ -0.81
SNF8-210ENST00000511214 TRAF5O00463 557 aa9.98□□□□□ -0.81
SNF8-210ENST00000511214 BUB1O43683 1085 aa9.98□□□□□ -0.81
SNF8-210ENST00000511214 KIF4AO95239 1232 aa9.98□□□□□ -0.81
SNF8-210ENST00000511214 KLRC1P26715 233 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms