RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 C16orf96A6NNT2 1141 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 RNMTO43148 476 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 UBE3CQ15386 1083 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 TSPYL6Q8N831 410 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 SYMPKQ92797 1274 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 SUFUQ9UMX1 484 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 SMG5Q9UPR3 1016 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 MYBL1P10243 752 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 RNF207Q6ZRF8 634 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 CHEK2O96017 543 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 ICA1Q05084 483 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 WDR75Q8IWA0 830 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 SYF2O95926 243 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 RPSAP08865 295 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 CRELD2Q6UXH1 353 aaPredicted RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 GAS7O60861 476 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 BYSLQ13895 437 aaKnown RBP9.01□□□□□ -0.97
HTT-208ENST00000510626 PLA2G4DQ86XP0 818 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 LINC00301Q8NCQ3 95 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 TMEM206Q9H813 350 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 SHROOM2Q13796 1616 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 YWHAGP61981 247 aaKnown RBP eCLIP9.01□□□□□ -0.97
HTT-208ENST00000510626 MYL7Q01449 175 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 SERTAD1Q9UHV2 236 aa9.01□□□□□ -0.97
HTT-208ENST00000510626 H0Y626 953 aa9□□□□□ -0.97
HTT-208ENST00000510626 TRIM16O95361 564 aa9□□□□□ -0.97
HTT-208ENST00000510626 FMNL1O95466 1100 aaPredicted RBP9□□□□□ -0.97
HTT-208ENST00000510626 NUGGCQ68CJ6 796 aa9□□□□□ -0.97
HTT-208ENST00000510626 RPS6KC1Q96S38 1066 aa9□□□□□ -0.97
HTT-208ENST00000510626 PLB1Q6P1J6 1458 aa9□□□□□ -0.97
HTT-208ENST00000510626 EIF3HO15372 352 aaKnown RBP eCLIP9□□□□□ -0.971e-6■■■■□ 24.6
HTT-208ENST00000510626 PDE8AO60658 829 aa9□□□□□ -0.97
HTT-208ENST00000510626 PSMC2P35998 433 aaKnown RBP9□□□□□ -0.97
HTT-208ENST00000510626 CHURC1Q8WUH1 139 aa9□□□□□ -0.97
HTT-208ENST00000510626 SIKE1Q9BRV8 207 aa9□□□□□ -0.97
HTT-208ENST00000510626 AZI2Q9H6S1 392 aa9□□□□□ -0.97
HTT-208ENST00000510626 SPATA31E1Q6ZUB1 1445 aa9□□□□□ -0.97
HTT-208ENST00000510626 A0A1W2PP64 1363 aa9□□□□□ -0.97
HTT-208ENST00000510626 JAK2O60674 1132 aa9□□□□□ -0.97
HTT-208ENST00000510626 PYGLP06737 847 aa9□□□□□ -0.97
HTT-208ENST00000510626 TAC1P20366 129 aa9□□□□□ -0.97
HTT-208ENST00000510626 FAM26FQ5R3K3 315 aa9□□□□□ -0.97
HTT-208ENST00000510626 YTHDF3Q7Z739 585 aaKnown RBP9□□□□□ -0.97
HTT-208ENST00000510626 DDI1Q8WTU0 396 aa9□□□□□ -0.97
HTT-208ENST00000510626 CMTM5Q96DZ9 223 aa9□□□□□ -0.97
HTT-208ENST00000510626 BRIP1Q9BX63 1249 aa9□□□□□ -0.97
HTT-208ENST00000510626 GID8Q9NWU2 228 aa9□□□□□ -0.97
HTT-208ENST00000510626 GABPAQ06546 454 aa9□□□□□ -0.97
HTT-208ENST00000510626 TSC22D1Q15714 1073 aa9□□□□□ -0.97
HTT-208ENST00000510626 KCTD16Q68DU8 428 aa9□□□□□ -0.97
HTT-208ENST00000510626 ATP6V0A1Q93050 837 aa9□□□□□ -0.97
HTT-208ENST00000510626 PSMB7Q99436 277 aa9□□□□□ -0.97
HTT-208ENST00000510626 POTEFA5A3E0 1075 aa9□□□□□ -0.97
HTT-208ENST00000510626 POTEIP0CG38 1075 aa9□□□□□ -0.97
HTT-208ENST00000510626 PDIA3P30101 505 aaKnown RBP9□□□□□ -0.97
HTT-208ENST00000510626 EIF4A3P38919 411 aaKnown RBP9□□□□□ -0.97
HTT-208ENST00000510626 POTEEQ6S8J3 1075 aa9□□□□□ -0.97
HTT-208ENST00000510626 VPS39Q96JC1 886 aa9□□□□□ -0.97
HTT-208ENST00000510626 OSBPL1AQ9BXW6 950 aa9□□□□□ -0.97
HTT-208ENST00000510626 AREL1O15033 823 aa9□□□□□ -0.97
HTT-208ENST00000510626 PLTPP55058 493 aa9□□□□□ -0.97
HTT-208ENST00000510626 CHST3Q7LGC8 479 aa9□□□□□ -0.97
HTT-208ENST00000510626 SMARCAL1Q9NZC9 954 aa9□□□□□ -0.97
HTT-208ENST00000510626 ATP10DQ9P241 1426 aa9□□□□□ -0.97
HTT-208ENST00000510626 GSTA4O15217 222 aa9□□□□□ -0.97
HTT-208ENST00000510626 ELF1P32519 619 aa9□□□□□ -0.97
HTT-208ENST00000510626 PPARGP37231 505 aaPredicted RBP9□□□□□ -0.97
HTT-208ENST00000510626 DHX34Q14147 1143 aaKnown RBP9□□□□□ -0.97
HTT-208ENST00000510626 TAF12Q16514 161 aa9□□□□□ -0.97
HTT-208ENST00000510626 MTHFSDQ2M296 383 aaKnown RBP9□□□□□ -0.97
HTT-208ENST00000510626 ZNF654Q8IZM8 581 aa9□□□□□ -0.97
HTT-208ENST00000510626 DACT3Q96B18 629 aaPredicted RBP9□□□□□ -0.97
HTT-208ENST00000510626 GCOM2Q9BZD3 368 aaPredicted RBP9□□□□□ -0.97
HTT-208ENST00000510626 GGCXP38435 758 aa9□□□□□ -0.97
HTT-208ENST00000510626 CNGA3Q16281 694 aa9□□□□□ -0.97
HTT-208ENST00000510626 TCP11X2Q5H9J9 407 aa9□□□□□ -0.97
HTT-208ENST00000510626 LCA5Q86VQ0 697 aa9□□□□□ -0.97
HTT-208ENST00000510626 MIGA1Q8NAN2 632 aa9□□□□□ -0.97
HTT-208ENST00000510626 MX2P20592 715 aa9□□□□□ -0.97
HTT-208ENST00000510626 VPS41P49754 854 aa9□□□□□ -0.97
HTT-208ENST00000510626 GNPTABQ3T906 1256 aa9□□□□□ -0.97
HTT-208ENST00000510626 A6NJR5 290 aa9□□□□□ -0.97
HTT-208ENST00000510626 RAP1GDS1P52306 607 aa9□□□□□ -0.97
HTT-208ENST00000510626 CORO7P57737 925 aa9□□□□□ -0.97
HTT-208ENST00000510626 GCKRQ14397 625 aa9□□□□□ -0.97
HTT-208ENST00000510626 INAQ16352 499 aa9□□□□□ -0.97
HTT-208ENST00000510626 TAF1BQ53T94 588 aaPredicted RBP9□□□□□ -0.97
HTT-208ENST00000510626 CCDC80Q76M96 950 aa9□□□□□ -0.97
HTT-208ENST00000510626 NT5C1BQ96P26 610 aa9□□□□□ -0.97
HTT-208ENST00000510626 ARHGEF37A1IGU5 675 aa9□□□□□ -0.97
HTT-208ENST00000510626 SPDYCQ5MJ68 293 aa9□□□□□ -0.97
HTT-208ENST00000510626 AGBL2Q5U5Z8 902 aa9□□□□□ -0.97
HTT-208ENST00000510626 RESP18Q5W5W9 173 aa9□□□□□ -0.97
HTT-208ENST00000510626 TRMT44Q8IYL2 757 aaKnown RBP9□□□□□ -0.97
HTT-208ENST00000510626 HDAC11Q96DB2 347 aa9□□□□□ -0.97
HTT-208ENST00000510626 CYP26B1Q9NR63 512 aa9□□□□□ -0.97
HTT-208ENST00000510626 GNGT2O14610 69 aa9□□□□□ -0.97
HTT-208ENST00000510626 IL2RBP14784 551 aa9□□□□□ -0.97
HTT-208ENST00000510626 E2F5Q15329 346 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms