RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 ABHD10Q9NUJ1 306 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 AGTPBP1Q9UPW5 1226 aa17.9■□□□□ 0.46
SQSTM1-213ENST00000510187 A0A1W2PQC6 194 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 VWA5AO00534 786 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 ADAMTS3O15072 1205 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 ZBED4O75132 1171 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 EEF1GP26641 437 aaKnown RBP17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 DSG3P32926 999 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 CCT6AP40227 531 aaKnown RBP17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 ADCY7P51828 1080 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 GTF2A2P52657 109 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 TRAF1Q13077 416 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 ORC2Q13416 577 aaPredicted RBP17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 TERF2Q15554 542 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 SPRYD7Q5W111 196 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 CEP112Q8N8E3 955 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 THAP9Q9H5L6 903 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 HOXC10Q9NYD6 342 aa17.89■□□□□ 0.46
SQSTM1-213ENST00000510187 RHOBTB3O94955 611 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 ZBTB48P10074 688 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 FDX1P10109 184 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 TAL1P17542 331 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 HOXA7P31268 230 aaPredicted RBP17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 PPP1R2P41236 205 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 PRCPP42785 496 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 MOGSQ13724 837 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 NAALADL2Q58DX5 795 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 KRT25Q7Z3Z0 450 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 CPXCR1Q8N123 301 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 CPLX3Q8WVH0 158 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 KBTBD4Q9NVX7 518 aa17.89■□□□□ 0.45
SQSTM1-213ENST00000510187 ZNF536O15090 1300 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 MYPNQ86TC9 1320 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 POTEB2H3BUK9 544 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 ICAM1P05362 532 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 CETPP11597 493 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 UBA7P41226 1012 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 ZNF157P51786 506 aaPredicted RBP17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 SRGAP1Q7Z6B7 1085 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 RASGRP4Q8TDF6 673 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 CUL5Q93034 780 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 MS4A4AQ96JQ5 239 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 PSTPIP2Q9H939 334 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 RIC8AQ9NPQ8 531 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 TAB2Q9NYJ8 693 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 CDC23Q9UJX2 597 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 CCPG1Q9ULG6 757 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 LOC285556D6RIA3 1793 aa17.88■□□□□ 0.45
SQSTM1-213ENST00000510187 SPDYE16A6NNV3 312 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 LGALS16A8MUM7 142 aa17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 MRPL12P52815 198 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 IRX3P78415 501 aaPredicted RBP17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 TEX35Q5T0J7 233 aa17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 AGBL1Q96MI9 1066 aa17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 RAVER2Q9HCJ3 691 aaKnown RBP17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 LZTFL1Q9NQ48 299 aa17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 ADAMTS5Q9UNA0 930 aa17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 GDAQ9Y2T3 454 aa17.87■□□□□ 0.45
SQSTM1-213ENST00000510187 CCL15-CCL14A0A0B4J2E2 113 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 PSMA7O14818 248 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 KLRC4O43908 158 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 ERVK-24P63145 666 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 FSTL1Q12841 308 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 PABPC4Q13310 644 aaKnown RBP eCLIP17.86■□□□□ 0.458e-10■■■□□ 18
SQSTM1-213ENST00000510187 CCL15Q16663 113 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 GPAT2Q6NUI2 795 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 RGMBQ6NW40 437 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 CC2D1AQ6P1N0 951 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 REXO1Q8N1G1 1221 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 GIMAP8Q8ND71 665 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 CCDC47Q96A33 483 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 DHTKD1Q96HY7 919 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 GLT8D2Q9H1C3 349 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 VPS16Q9H269 839 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 TMEM60Q9H2L4 133 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 ABT1Q9ULW3 272 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 TLL2Q9Y6L7 1015 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 ABCB11O95342 1321 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 CTAGE9A4FU28 777 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 TMEM88BA6NKF7 163 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 CHMP4BP1P59074 171 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 BRD3Q15059 726 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 INF2Q27J81 1249 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 ZNF771Q7L3S4 317 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 RASAL3Q86YV0 1011 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 RASSF8Q8NHQ8 419 aa17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 ASCC2Q9H1I8 757 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 BIN2Q9UBW5 565 aaPredicted RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 MRPL11Q9Y3B7 192 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-213ENST00000510187 OR52Z1P0C646 297 aa17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 OSBPP22059 807 aa17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 PLA2G4AP47712 749 aa17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 UBXN1Q04323 297 aa17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 IRF2BP1Q8IU81 584 aa17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 MB21D1Q8N884 522 aa17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 REPS2Q8NFH8 660 aa17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 P2RX7Q99572 595 aaKnown RBP17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 MAGEC2Q9UBF1 373 aaPredicted RBP17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 PNMA2Q9UL42 364 aa17.85■□□□□ 0.45
SQSTM1-213ENST00000510187 PARP14Q460N5 1801 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms