RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 THAP9Q9H5L6 903 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 ZHX2Q9Y6X8 837 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 LRRC10BA6NIK2 292 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 PIK3CDO00329 1044 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 CASP5P51878 434 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 PRPF38AQ8NAV1 312 aaKnown RBP16.56■□□□□ 0.24
PHF3-209ENST00000509330 ERMNQ8TAM6 284 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 ATG4CQ96DT6 458 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 DYDC2Q96IM9 177 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 DNM3Q9UQ16 869 aa16.56■□□□□ 0.24
PHF3-209ENST00000509330 PVALEFA0A1B0GWK0 134 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 TTC26A0AVF1 554 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 LGALS16A8MUM7 142 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 STX10O60499 249 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 PEX10O60683 326 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 GAS7O60861 476 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 TPM1P09493 284 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 MAP3K10Q02779 954 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 TBC1D8BQ0IIM8 1120 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 SYCP1Q15431 976 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 REXO1L1PQ8IX06 675 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 ACRBPQ8NEB7 543 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 ZNF577Q9BSK1 485 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 CTNND1O60716 968 aaKnown RBP16.55■□□□□ 0.24
PHF3-209ENST00000509330 DDNO94850 711 aaPredicted RBP16.55■□□□□ 0.24
PHF3-209ENST00000509330 EEF1GP26641 437 aaKnown RBP16.55■□□□□ 0.24
PHF3-209ENST00000509330 HIRAP54198 1017 aaPredicted RBP16.55■□□□□ 0.24
PHF3-209ENST00000509330 SLC12A3P55017 1021 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 REEP2Q9BRK0 252 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 MRPL44Q9H9J2 332 aaKnown RBP16.55■□□□□ 0.24
PHF3-209ENST00000509330 SYNPO2Q9UMS6 1093 aa16.55■□□□□ 0.24
PHF3-209ENST00000509330 ICAM1P05362 532 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 MYCLP12524 364 aaPredicted RBP16.54■□□□□ 0.24
PHF3-209ENST00000509330 CEP55Q53EZ4 464 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 MOXD1Q6UVY6 613 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 MAEAQ7L5Y9 396 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 MYOCDQ8IZQ8 938 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 KIF18AQ8NI77 898 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 RUSC1Q9BVN2 902 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 WDR11Q9BZH6 1224 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 ABHD10Q9NUJ1 306 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 TRAF5O00463 557 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 WDR46O15213 610 aaKnown RBP16.54■□□□□ 0.24
PHF3-209ENST00000509330 FANCGO15287 622 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 TRIM21P19474 475 aaKnown RBP16.54■□□□□ 0.24
PHF3-209ENST00000509330 CIITAP33076 1130 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 BRCA1P38398 1863 aaKnown RBP16.54■□□□□ 0.24
PHF3-209ENST00000509330 ERVK-24P63145 666 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 CENPPQ6IPU0 288 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 BANK1Q8NDB2 785 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 FAM20AQ96MK3 541 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 CHP1Q99653 195 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 IKZF4Q9H2S9 585 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
PHF3-209ENST00000509330 SORBS3O60504 671 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 RPA1P27694 616 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 TERF1P54274 439 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 CCDC65Q8IXS2 484 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 KIAA1683Q9H0B3 1180 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 RIPK3Q9Y572 518 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.53■□□□□ 0.243e-8■□□□□ 9.7
PHF3-209ENST00000509330 TULP1O00294 542 aaPredicted RBP16.53■□□□□ 0.24
PHF3-209ENST00000509330 ITGB5P18084 799 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 HYIQ5T013 277 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 OTOP1Q7RTM1 612 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 SFR1Q86XK3 245 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 CNGA4Q8IV77 575 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 WRAP73Q9P2S5 460 aaPredicted RBP16.53■□□□□ 0.24
PHF3-209ENST00000509330 TFR2Q9UP52 801 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 ABL1P00519 1130 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 GUF1Q8N442 669 aaKnown RBP16.53■□□□□ 0.24
PHF3-209ENST00000509330 CLEC4DQ8WXI8 215 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 FHDC1Q9C0D6 1143 aaPredicted RBP16.53■□□□□ 0.24
PHF3-209ENST00000509330 LRRC27Q9C0I9 530 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 UNC45AQ9H3U1 944 aa16.53■□□□□ 0.24
PHF3-209ENST00000509330 FAM207AQ9NSI2 230 aaPredicted RBP16.53■□□□□ 0.24
PHF3-209ENST00000509330 TBX3O15119 743 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 CYP3A4P08684 503 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 GNG11P61952 73 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 PLS1Q14651 629 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 MIIPQ5JXC2 388 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 ZNF507Q8TCN5 953 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 UPF1Q92900 1129 aaKnown RBP eCLIP16.52■□□□□ 0.24
PHF3-209ENST00000509330 PANX2Q96RD6 677 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 TAAR1Q96RJ0 339 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 GPRC5DQ9NZD1 345 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 RABGAP1Q9Y3P9 1069 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 SAMM50Q9Y512 469 aa16.52■□□□□ 0.24
PHF3-209ENST00000509330 ZSCAN12O43309 604 aa16.52■□□□□ 0.23
PHF3-209ENST00000509330 PRPF6O94906 941 aaKnown RBP16.52■□□□□ 0.23
PHF3-209ENST00000509330 RPS6P62753 249 aaKnown RBP16.52■□□□□ 0.23
PHF3-209ENST00000509330 EHHADHQ08426 723 aa16.52■□□□□ 0.23
PHF3-209ENST00000509330 GIT2Q14161 759 aa16.52■□□□□ 0.23
PHF3-209ENST00000509330 KSR1Q8IVT5 923 aa16.52■□□□□ 0.23
PHF3-209ENST00000509330 LRRN4CLQ8ND94 238 aa16.52■□□□□ 0.23
PHF3-209ENST00000509330 SMCR8Q8TEV9 937 aaPredicted RBP16.52■□□□□ 0.23
PHF3-209ENST00000509330 PAXBP1Q9Y5B6 917 aa16.52■□□□□ 0.23
PHF3-209ENST00000509330 IPO5O00410 1097 aaKnown RBP16.51■□□□□ 0.23
PHF3-209ENST00000509330 MYBP10242 640 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms