RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 DPY19L1Q2PZI1 675 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 HSP90AB2PQ58FF8 381 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 NUP188Q5SRE5 1749 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 NBPF6Q5VWK0 638 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 MRM1Q6IN84 353 aaKnown RBP4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 LINC00116Q8NCU8 138 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 NBPF4Q96M43 638 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 APBA2Q99767 749 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 CDADC1Q9BWV3 514 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 EBF1Q9UH73 591 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 TMEM59LQ9UK28 342 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 CTNND2Q9UQB3 1225 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 RTL1A6NKG5 1358 aa4.76□□□□□ -1.65
UBE2D3-226ENST00000508635 NSD3Q9BZ95 1437 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 SBF2Q86WG5 1849 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 TMEM82A0PJX8 343 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 CCDC85CA6NKD9 419 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 HSPA5P11021 654 aaKnown RBP4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 BMP8BP34820 402 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 TRHRP34981 398 aaPredicted RBP4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 RAB33AQ14088 237 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 DDR2Q16832 855 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 SV2CQ496J9 727 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 FYB2Q5VWT5 728 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 AP5S1Q9NUS5 200 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 PRR13Q9NZ81 148 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 LRP2BPQ9P2M1 347 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 CGGBP1Q9UFW8 167 aaPredicted RBP4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 AKT3Q9Y243 479 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 DIS3Q9Y2L1 958 aaKnown RBP4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 SF3B6Q9Y3B4 125 aaKnown RBP4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 MYOM1P52179 1685 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 RGPD3A6NKT7 1758 aaPredicted RBP4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 RGPD4Q7Z3J3 1758 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 INSRP06213 1382 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 FLT4P35916 1363 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 KIF24Q5T7B8 1368 aa4.75□□□□□ -1.65
UBE2D3-226ENST00000508635 FAM208AQ9UK61 1670 aaKnown RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 MEGF6O75095 1541 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 A0A087WZG4 1122 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 STXBP3O00186 592 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 U2SURPO15042 1029 aaKnown RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 SUSD5O60279 629 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 USP2O75604 605 aaPredicted RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 ZNF205O95201 554 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 KCNH1O95259 989 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 IFNGR1P15260 489 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 GDNFP39905 211 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 POU4F1Q01851 419 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 SF3A1Q15459 793 aaKnown RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 RTP2Q5QGT7 225 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 TTLL10Q6ZVT0 673 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 ZNF513Q8N8E2 541 aaPredicted RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 ZCRB1Q8TBF4 217 aaKnown RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 SREK1Q8WXA9 508 aaKnown RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 FAM84AQ96KN4 292 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 FCRL3Q96P31 734 aaPredicted RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 DNAJC2Q99543 621 aaKnown RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 MCMBPQ9BTE3 642 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 SLC12A9Q9BXP2 914 aa4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 GPR55Q9Y2T6 319 aaPredicted RBP4.74□□□□□ -1.65
UBE2D3-226ENST00000508635 NHSQ6T4R5 1651 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 CGNL1Q0VF96 1302 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 SMG6Q86US8 1419 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 NOP56O00567 594 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 PPM1GO15355 546 aaPredicted RBP4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 NAT2P11245 290 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 RAC2P15153 192 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 AFMP43652 599 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 NOP2P46087 812 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 GALK1P51570 392 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 SLC15A2Q16348 729 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 ATG4DQ86TL0 474 aaPredicted RBP4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 ARHGEF39Q8N4T4 335 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 BVESQ8NE79 360 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 MYLIPQ8WY64 445 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 RAPGEF4Q8WZA2 1011 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 CCDC120Q96HB5 630 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 RCC1LQ96I51 464 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 KIRREL1Q96J84 757 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 POLR3GLQ9BT43 218 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 G6PC3Q9BUM1 346 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 PDGFDQ9GZP0 370 aaPredicted RBP4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 PANK3Q9H999 370 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 SPON1Q9HCB6 807 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 POLKQ9UBT6 870 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 ZNF281Q9Y2X9 895 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 KIF20BQ96Q89 1820 aa4.73□□□□□ -1.65
UBE2D3-226ENST00000508635 WASHC2AQ641Q2 1341 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 TBX1O43435 398 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 ITGAVP06756 1048 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 AMPD2Q01433 879 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 DUSP4Q13115 394 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 SLC14A2Q15849 920 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 TIGD5Q53EQ6 642 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 DBX2Q6ZNG2 339 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 CEP128Q6ZU80 1094 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 EEPD1Q7L9B9 569 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 SIRT2Q8IXJ6 389 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms