RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 RABGAP1Q9Y3P9 1069 aa19.63■□□□□ 0.73
SFXN1-208ENST00000507823 SLU7O95391 586 aaKnown RBP19.62■□□□□ 0.73
SFXN1-208ENST00000507823 CFBP00751 764 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 MUTP22033 750 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 INPP5BP32019 993 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 MTIF2P46199 727 aaKnown RBP19.62■□□□□ 0.73
SFXN1-208ENST00000507823 TBC1D8BQ0IIM8 1120 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 TSG101Q99816 390 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 DESI2Q9BSY9 194 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 NOC4LQ9BVI4 516 aaKnown RBP19.62■□□□□ 0.73
SFXN1-208ENST00000507823 ZNF341Q9BYN7 854 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 DNM3Q9UQ16 869 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 LUC7L2Q9Y383 392 aaKnown RBP19.62■□□□□ 0.73
SFXN1-208ENST00000507823 GOLGB1Q14789 3259 aaKnown RBP19.62■□□□□ 0.73
SFXN1-208ENST00000507823 RBM10P98175 930 aaKnown RBP19.62■□□□□ 0.73
SFXN1-208ENST00000507823 MAN2A1Q16706 1144 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 OTOP1Q7RTM1 612 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 CREBRFQ8IUR6 639 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 HSD17B14Q9BPX1 270 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 RPTORQ8N122 1335 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 DOCK1Q14185 1865 aa19.62■□□□□ 0.73
SFXN1-208ENST00000507823 ZNF76P36508 570 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 GMPSP49915 693 aaPredicted RBP19.61■□□□□ 0.73
SFXN1-208ENST00000507823 MARSP56192 900 aaKnown RBP19.61■□□□□ 0.73
SFXN1-208ENST00000507823 VWA3BQ502W6 1294 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 B3GNT9Q6UX72 402 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 SAMD3Q8N6K7 520 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 CEP63Q96MT8 703 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 TUFT1Q9NNX1 390 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 ZNF215Q9UL58 517 aaPredicted RBP19.61■□□□□ 0.73
SFXN1-208ENST00000507823 MEIS1O00470 390 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 KIF20AO95235 890 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 GIT2Q14161 759 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 ZYXQ15942 572 aaKnown RBP19.61■□□□□ 0.73
SFXN1-208ENST00000507823 PRPF38AQ8NAV1 312 aaKnown RBP19.61■□□□□ 0.73
SFXN1-208ENST00000507823 EIF2AK1Q9BQI3 630 aaKnown RBP19.61■□□□□ 0.73
SFXN1-208ENST00000507823 KCTD10Q9H3F6 313 aa19.61■□□□□ 0.73
SFXN1-208ENST00000507823 EML1O00423 815 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 PRELPP51888 382 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 PSMC6P62333 389 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 CEP55Q53EZ4 464 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 MICALL2Q8IY33 904 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 UIMC1Q96RL1 719 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 SIK3Q9Y2K2 1263 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 PARP14Q460N5 1801 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 NKRFO15226 690 aaKnown RBP eCLIP19.6■□□□□ 0.73
SFXN1-208ENST00000507823 EYA4O95677 639 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 CDK17Q00537 523 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 FKBP3Q00688 224 aaKnown RBP19.6■□□□□ 0.73
SFXN1-208ENST00000507823 SETQ01105 290 aaPredicted RBP19.6■□□□□ 0.73
SFXN1-208ENST00000507823 LRRC41Q15345 812 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 WDR59Q6PJI9 974 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
SFXN1-208ENST00000507823 SCFD1Q8WVM8 642 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 CLEC4DQ8WXI8 215 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 SLF1Q9BQI6 1058 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 PDCL3Q9H2J4 239 aa19.6■□□□□ 0.73
SFXN1-208ENST00000507823 SSBP05455 408 aaKnown RBP eCLIP19.59■□□□□ 0.73
SFXN1-208ENST00000507823 ZBED6P86452 979 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 FKBP15Q5T1M5 1219 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 PPP4R3CPQ6ZMV5 832 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 EPM2AIP1Q7L775 607 aaPredicted RBP19.59■□□□□ 0.73
SFXN1-208ENST00000507823 FGFBP2Q9BYJ0 223 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 NDST4Q9H3R1 872 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 MAP3K20Q9NYL2 800 aaKnown RBP19.59■□□□□ 0.73
SFXN1-208ENST00000507823 ZNF112Q9UJU3 913 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 FRMPD4Q14CM0 1322 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 NPHP3-ACAD11A0A0J9YXS1 232 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 BCRP11274 1271 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 WDR24Q96S15 920 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 FEZ1Q99689 392 aa19.59■□□□□ 0.73
SFXN1-208ENST00000507823 HNRNPH3P31942 346 aaKnown RBP19.58■□□□□ 0.73
SFXN1-208ENST00000507823 EDRF1Q3B7T1 1238 aa19.58■□□□□ 0.73
SFXN1-208ENST00000507823 HERC4Q5GLZ8 1057 aaPredicted RBP19.58■□□□□ 0.73
SFXN1-208ENST00000507823 ZNF662Q6ZS27 426 aa19.58■□□□□ 0.73
SFXN1-208ENST00000507823 NIPA1Q7RTP0 329 aa19.58■□□□□ 0.73
SFXN1-208ENST00000507823 EEF2KMTQ96G04 330 aa19.58■□□□□ 0.73
SFXN1-208ENST00000507823 SLC38A10Q9HBR0 1119 aa19.58■□□□□ 0.73
SFXN1-208ENST00000507823 CNOT7Q9UIV1 285 aaKnown RBP19.58■□□□□ 0.73
SFXN1-208ENST00000507823 PNMA2Q9UL42 364 aa19.58■□□□□ 0.73
SFXN1-208ENST00000507823 GNA14O95837 355 aa19.58■□□□□ 0.72
SFXN1-208ENST00000507823 GNG11P61952 73 aa19.58■□□□□ 0.72
SFXN1-208ENST00000507823 ARHGAP27Q6ZUM4 889 aa19.58■□□□□ 0.72
SFXN1-208ENST00000507823 HACL1Q9UJ83 578 aa19.58■□□□□ 0.72
SFXN1-208ENST00000507823 LOXHD1Q8IVV2 1947 aa19.58■□□□□ 0.72
SFXN1-208ENST00000507823 BMT2Q1RMZ1 405 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 LRCH2Q5VUJ6 765 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 AGBL1Q96MI9 1066 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 CHP1Q99653 195 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 WDR11Q9BZH6 1224 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 EMILIN3Q9NT22 766 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 CCPG1Q9ULG6 757 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 BCS1LQ9Y276 419 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 COL4A3BPQ9Y5P4 624 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 SLITRK3O94933 977 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 PABPC4Q13310 644 aaKnown RBP eCLIP19.57■□□□□ 0.72
SFXN1-208ENST00000507823 MCF2L2Q86YR7 1114 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 REEP2Q9BRK0 252 aa19.57■□□□□ 0.72
SFXN1-208ENST00000507823 EPN1Q9Y6I3 576 aaPredicted RBP19.57■□□□□ 0.72
SFXN1-208ENST00000507823 ASTN2O75129 1339 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms