RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 BMP3P12645 472 aa24.39■■□□□ 1.49
SPCS3-203ENST00000507678 USP11P51784 963 aa24.39■■□□□ 1.49
SPCS3-203ENST00000507678 AMPD2Q01433 879 aa24.39■■□□□ 1.49
SPCS3-203ENST00000507678 PSMD2Q13200 908 aa24.39■■□□□ 1.49
SPCS3-203ENST00000507678 ENOX2Q16206 610 aaKnown RBP24.39■■□□□ 1.49
SPCS3-203ENST00000507678 SUGCTQ9HAC7 445 aa24.39■■□□□ 1.49
SPCS3-203ENST00000507678 UTRNP46939 3433 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 CYP11B2P19099 503 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 ZNF76P36508 570 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 EIF4A3P38919 411 aaKnown RBP24.38■■□□□ 1.49
SPCS3-203ENST00000507678 WHAMMP3Q1A5X7 153 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 LONRF2Q1L5Z9 754 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 CATSPER3Q86XQ3 398 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 YDJCA8MPS7 323 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 EIF3CLB5ME19 914 aaKnown RBP24.38■■□□□ 1.49
SPCS3-203ENST00000507678 FKBP3Q00688 224 aaKnown RBP24.38■■□□□ 1.49
SPCS3-203ENST00000507678 KIF5AQ12840 1032 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 EIF3CQ99613 913 aaKnown RBP24.38■■□□□ 1.49
SPCS3-203ENST00000507678 ZCCHC17Q9NP64 241 aaKnown RBP24.38■■□□□ 1.49
SPCS3-203ENST00000507678 COL4A3BPQ9Y5P4 624 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 SIPA1L1O43166 1804 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 ZNF185O15231 689 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 AKR1B10O60218 316 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 UBXN2AP68543 259 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 CCDC170Q8IYT3 715 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 ANKRD13CQ8N6S4 541 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.38■■□□□ 1.49
SPCS3-203ENST00000507678 JADE2Q9NQC1 790 aa24.38■■□□□ 1.49
SPCS3-203ENST00000507678 RAD17O75943 681 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 NEK11Q8NG66 645 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 IFIH1Q9BYX4 1025 aaKnown RBP24.37■■□□□ 1.49
SPCS3-203ENST00000507678 GLT8D2Q9H1C3 349 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 SAR1BQ9Y6B6 198 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 A0A1W2PQJ5 194 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 PSMD14O00487 310 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 ARSHQ5FYA8 562 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 CCDC174Q6PII3 467 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 NAP1L4Q99733 375 aaKnown RBP24.37■■□□□ 1.49
SPCS3-203ENST00000507678 MLXIPQ9HAP2 919 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 PLAGL2Q9UPG8 496 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 ARFGEF1Q9Y6D6 1849 aa24.37■■□□□ 1.49
SPCS3-203ENST00000507678 GREB1LQ9C091 1923 aaPredicted RBP24.36■■□□□ 1.49
SPCS3-203ENST00000507678 CASP5P51878 434 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 KIF11P52732 1056 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 ARID5AQ03989 594 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 TDRD12Q587J7 1177 aaKnown RBP24.36■■□□□ 1.49
SPCS3-203ENST00000507678 STYK1Q6J9G0 422 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 CCDC84Q86UT8 332 aaPredicted RBP24.36■■□□□ 1.49
SPCS3-203ENST00000507678 SLFN12Q8IYM2 578 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 ACER1Q8TDN7 264 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 MMS19Q96T76 1030 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 BCAS3Q9H6U6 928 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 EMILIN3Q9NT22 766 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 CFBP00751 764 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 VSNL1P62760 191 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 HDLBPQ00341 1268 aaKnown RBP24.36■■□□□ 1.49
SPCS3-203ENST00000507678 TUBB2AQ13885 445 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 TRAPPC11Q7Z392 1133 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 ETNPPLQ8TBG4 499 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 SCFD1Q8WVM8 642 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 TBC1D5Q92609 795 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 PSMB7Q99436 277 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 TUBB2BQ9BVA1 445 aa24.36■■□□□ 1.49
SPCS3-203ENST00000507678 AP3B2Q13367 1082 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 FIGNQ5HY92 759 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 CAGE1Q8TC20 777 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 HINFPQ9BQA5 517 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 FUT8Q9BYC5 575 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 SCAF8Q9UPN6 1271 aaKnown RBP24.35■■□□□ 1.49
SPCS3-203ENST00000507678 ZBTB12Q9Y330 459 aaPredicted RBP24.35■■□□□ 1.49
SPCS3-203ENST00000507678 CCDC151A5D8V7 595 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 CHMP2AO43633 222 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 KCNMA1Q12791 1236 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 ZCWPW2Q504Y3 356 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 KIAA1755Q5JYT7 1200 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 HAUS3Q68CZ6 603 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 CC2D2BQ6DHV5 1058 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 SECISBP2LQ93073 1101 aaKnown RBP24.35■■□□□ 1.49
SPCS3-203ENST00000507678 MRIQ9BWK5 157 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 PRR12Q9ULL5 1215 aa24.35■■□□□ 1.49
SPCS3-203ENST00000507678 VAV2P52735 878 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 HYIQ5T013 277 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 CNKSR1Q969H4 720 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 TRERF1Q96PN7 1200 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 VEZTQ9HBM0 779 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 ABCB6Q9NP58 842 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 RGL1Q9NZL6 768 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 PCDHA13Q9Y5I0 950 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 OPLAHO14841 1288 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 MOCS3O95396 460 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 SLC12A3P55017 1021 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 GFPT1Q06210 699 aaPredicted RBP24.34■■□□□ 1.49
SPCS3-203ENST00000507678 CDAN1Q8IWY9 1227 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 GMCL1P1Q8NEA9 526 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 LSM14BQ9BX40 385 aaKnown RBP24.34■■□□□ 1.49
SPCS3-203ENST00000507678 SMCHD1A6NHR9 2005 aa24.34■■□□□ 1.49
SPCS3-203ENST00000507678 C10orf71Q711Q0 1435 aa24.33■■□□□ 1.49
SPCS3-203ENST00000507678 EPS15P42566 896 aa24.33■■□□□ 1.49
SPCS3-203ENST00000507678 SPIRE1Q08AE8 756 aa24.33■■□□□ 1.49
SPCS3-203ENST00000507678 ADAM9Q13443 819 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms