RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SUPT20HL2P0C7V6 817 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 ZNF286BP0CG31 522 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 MAGEA10P43363 369 aaPredicted RBP18.99■□□□□ 0.63
SNCA-209ENST00000506244 MCM2P49736 904 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 HMGN5P82970 282 aaKnown RBP18.99■□□□□ 0.63
SNCA-209ENST00000506244 FAAP100Q0VG06 881 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 FAM47CQ5HY64 1035 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 CHRDL2Q6WN34 429 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 KRT25Q7Z3Z0 450 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 CCDC83Q8IWF9 413 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 ZNF215Q9UL58 517 aaPredicted RBP18.99■□□□□ 0.63
SNCA-209ENST00000506244 GRIN2DO15399 1336 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 NFASCO94856 1347 aa18.99■□□□□ 0.63
SNCA-209ENST00000506244 DNAH12Q6ZR08 3092 aa18.98■□□□□ 0.63
SNCA-209ENST00000506244 NBPF20Q3BBV1 942 aa18.98■□□□□ 0.63
SNCA-209ENST00000506244 SESTD1Q86VW0 696 aa18.98■□□□□ 0.63
SNCA-209ENST00000506244 PLA2G4DQ86XP0 818 aa18.98■□□□□ 0.63
SNCA-209ENST00000506244 GPR20Q99678 358 aa18.98■□□□□ 0.63
SNCA-209ENST00000506244 JPH1Q9HDC5 661 aaPredicted RBP18.98■□□□□ 0.63
SNCA-209ENST00000506244 TCEAL9Q9UHQ7 104 aa18.98■□□□□ 0.63
SNCA-209ENST00000506244 TBX21Q9UL17 535 aa18.98■□□□□ 0.63
SNCA-209ENST00000506244 CCDC194A0A1B0GVG4 234 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 A0A1W2PPC1 479 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 JAK2O60674 1132 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 CD4P01730 458 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 LGALS2P05162 132 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 RAG1P15918 1043 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 CIITAP33076 1130 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 PSEN2P49810 448 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 USP11P51784 963 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 CHMP4BP1P59074 171 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 SP4Q02446 784 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 MFSD10Q14728 455 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 NONOQ15233 471 aaKnown RBP eCLIP18.97■□□□□ 0.63
SNCA-209ENST00000506244 C7orf31Q8N865 590 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 TBCKQ8TEA7 893 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 KAT2BQ92831 832 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 GDF15Q99988 308 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 AGO4Q9HCK5 861 aaKnown RBP18.97■□□□□ 0.63
SNCA-209ENST00000506244 PKD2L1Q9P0L9 805 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 KCNJ14Q9UNX9 436 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 DOCK5Q9H7D0 1870 aa18.97■□□□□ 0.63
SNCA-209ENST00000506244 IGLV3-22A0A075B6J6 115 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 TRIM43BA6NCK2 446 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 FAM86B1E9PN63 330 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 M0R2N6 131 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 B4GALT4O60513 344 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 ATP9AO75110 1047 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 FAM86B2P0C5J1 330 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 FDPSP14324 419 aaKnown RBP18.96■□□□□ 0.63
SNCA-209ENST00000506244 BMP8BP34820 402 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 KRT2P35908 639 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 NPY5RQ15761 445 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 KIAA0753Q2KHM9 967 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 SH3RF1Q7Z6J0 888 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 CYP2W1Q8TAV3 490 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 TRIM43Q96BQ3 446 aaPredicted RBP18.96■□□□□ 0.63
SNCA-209ENST00000506244 SLC9A2Q9UBY0 812 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 NOD1Q9Y239 953 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 KIF3AQ9Y496 699 aa18.96■□□□□ 0.63
SNCA-209ENST00000506244 H3BRB1 525 aa18.95■□□□□ 0.62
SNCA-209ENST00000506244 HAS3O00219 553 aa18.95■□□□□ 0.62
SNCA-209ENST00000506244 ADAMTS3O15072 1205 aa18.95■□□□□ 0.62
SNCA-209ENST00000506244 ARP10275 920 aa18.95■□□□□ 0.62
SNCA-209ENST00000506244 MDM2Q00987 491 aaPredicted RBP18.95■□□□□ 0.62
SNCA-209ENST00000506244 PRR16Q569H4 304 aa18.95■□□□□ 0.62
SNCA-209ENST00000506244 CCDC155Q8N6L0 562 aa18.95■□□□□ 0.62
SNCA-209ENST00000506244 SEPT1Q8WYJ6 367 aa18.95■□□□□ 0.62
SNCA-209ENST00000506244 NAP1L4Q99733 375 aaKnown RBP18.95■□□□□ 0.62
SNCA-209ENST00000506244 C16orf70Q9BSU1 422 aa18.95■□□□□ 0.62
SNCA-209ENST00000506244 UBE2OQ9C0C9 1292 aaKnown RBP18.95■□□□□ 0.62
SNCA-209ENST00000506244 TUT1Q9H6E5 874 aaKnown RBP18.95■□□□□ 0.62
SNCA-209ENST00000506244 TBC1D22BQ9NU19 505 aa18.95■□□□□ 0.62
SNCA-209ENST00000506244 COLQQ9Y215 455 aaPredicted RBP18.95■□□□□ 0.62
SNCA-209ENST00000506244 IPO5O00410 1097 aaKnown RBP18.94■□□□□ 0.62
SNCA-209ENST00000506244 TIMP1P01033 207 aa18.94■□□□□ 0.62
SNCA-209ENST00000506244 TCF7P36402 384 aaPredicted RBP18.94■□□□□ 0.62
SNCA-209ENST00000506244 SAFBQ15424 915 aaKnown RBP eCLIP18.94■□□□□ 0.62
SNCA-209ENST00000506244 MOXD1Q6UVY6 613 aa18.94■□□□□ 0.62
SNCA-209ENST00000506244 FAM184AQ8NB25 1140 aa18.94■□□□□ 0.62
SNCA-209ENST00000506244 ZNF577Q9BSK1 485 aa18.94■□□□□ 0.62
SNCA-209ENST00000506244 TRPV6Q9H1D0 765 aa18.94■□□□□ 0.62
SNCA-209ENST00000506244 PRO3102Q9H379 93 aa18.94■□□□□ 0.62
SNCA-209ENST00000506244 HIPK3Q9H422 1215 aa18.94■□□□□ 0.62
SNCA-209ENST00000506244 TRMT13Q9NUP7 481 aaKnown RBP18.94■□□□□ 0.62
SNCA-209ENST00000506244 GTF2IRD1Q9UHL9 959 aa18.94■□□□□ 0.62
SNCA-209ENST00000506244 EMSYQ7Z589 1322 aa18.94■□□□□ 0.62
SNCA-209ENST00000506244 MMP1P03956 469 aa18.93■□□□□ 0.62
SNCA-209ENST00000506244 ITGB3BPQ13352 177 aaPredicted RBP18.93■□□□□ 0.62
SNCA-209ENST00000506244 BADQ92934 168 aa18.93■□□□□ 0.62
SNCA-209ENST00000506244 AZI2Q9H6S1 392 aa18.93■□□□□ 0.62
SNCA-209ENST00000506244 BCAS3Q9H6U6 928 aa18.93■□□□□ 0.62
SNCA-209ENST00000506244 GCFC2P16383 781 aaKnown RBP18.92■□□□□ 0.62
SNCA-209ENST00000506244 FPGSQ05932 587 aa18.92■□□□□ 0.62
SNCA-209ENST00000506244 PTGISQ16647 500 aa18.92■□□□□ 0.62
SNCA-209ENST00000506244 UTP14CQ5TAP6 766 aaKnown RBP18.92■□□□□ 0.62
SNCA-209ENST00000506244 NEK8Q86SG6 692 aa18.92■□□□□ 0.62
SNCA-209ENST00000506244 TMEM199Q8N511 208 aa18.92■□□□□ 0.62
SNCA-209ENST00000506244 GLG1Q92896 1179 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms