RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 PABPC4Q13310 644 aaKnown RBP eCLIP5.78□□□□□ -1.48
CHD1-203ENST00000505657 ZNF460Q14592 562 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 SLC9A5Q14940 896 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 FNDC3BQ53EP0 1204 aaKnown RBP5.78□□□□□ -1.48
CHD1-203ENST00000505657 FAM26EQ8N5C1 309 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 PANK1Q8TE04 598 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 SH3RF2Q8TEC5 729 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 SLC6A20Q9NP91 592 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 MYOTQ9UBF9 498 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 COQ6Q9Y2Z9 468 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 TELO2Q9Y4R8 837 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 PCDHB4Q9Y5E5 795 aa5.78□□□□□ -1.48
CHD1-203ENST00000505657 TLDC2A0PJX2 215 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 ENPP3O14638 875 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 WNT9AO14904 365 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 AMY2AP04746 511 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 C8BP07358 591 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 PI3P19957 117 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 AMY2BP19961 511 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 STAT5AP42229 794 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 FSTL4Q6MZW2 842 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 C16orf86Q6ZW13 317 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 MIB1Q86YT6 1006 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 ZC3H7AQ8IWR0 971 aaKnown RBP5.77□□□□□ -1.49
CHD1-203ENST00000505657 CISD2Q8N5K1 135 aaKnown RBP5.77□□□□□ -1.49
CHD1-203ENST00000505657 UHMK1Q8TAS1 419 aaKnown RBP5.77□□□□□ -1.49
CHD1-203ENST00000505657 CD244Q9BZW8 370 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 PARD6AQ9NPB6 346 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 ASH2LQ9UBL3 628 aa5.77□□□□□ -1.49
CHD1-203ENST00000505657 CCDC66A2RUB6 948 aa5.76□□□□□ -1.49
CHD1-203ENST00000505657 KCNK3O14649 394 aa5.76□□□□□ -1.49
CHD1-203ENST00000505657 DNM2P50570 870 aa5.76□□□□□ -1.49
CHD1-203ENST00000505657 RBM10P98175 930 aaKnown RBP5.76□□□□□ -1.49
CHD1-203ENST00000505657 TCEA2Q15560 299 aa5.76□□□□□ -1.49
CHD1-203ENST00000505657 CHRNA2Q15822 529 aa5.76□□□□□ -1.49
CHD1-203ENST00000505657 FBXW5Q969U6 566 aa5.76□□□□□ -1.49
CHD1-203ENST00000505657 SIGLEC10Q96LC7 697 aa5.76□□□□□ -1.49
CHD1-203ENST00000505657 MAGEB10Q96LZ2 347 aaPredicted RBP5.76□□□□□ -1.49
CHD1-203ENST00000505657 SMOC1Q9H4F8 434 aa5.76□□□□□ -1.49
CHD1-203ENST00000505657 TNPO3Q9Y5L0 923 aaKnown RBP5.76□□□□□ -1.49
CHD1-203ENST00000505657 FAM83GA6ND36 823 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 KRIT1O00522 736 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 FOXD2O60548 495 aaPredicted RBP5.75□□□□□ -1.49
CHD1-203ENST00000505657 RFPL3O75679 317 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 PLA2G1BP04054 148 aaKnown RBP5.75□□□□□ -1.49
CHD1-203ENST00000505657 NCAM1P13591 858 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 PDE6AP16499 860 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 KRT15P19012 456 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 JAM2P57087 298 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 GRIN1Q05586 938 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 SPIRE1Q08AE8 756 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 SDE2Q6IQ49 451 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 ETV3LQ6ZN32 361 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 OSTM1Q86WC4 334 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 FAM126BQ8IXS8 530 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 SMARCC2Q8TAQ2 1214 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 CLEC4DQ8WXI8 215 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 NOX5Q96PH1 765 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 RNF38Q9H0F5 515 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 SMURF1Q9HCE7 757 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 CATSPERZQ9NTU4 200 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 KCTD3Q9Y597 815 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 IRAK3Q9Y616 596 aa5.75□□□□□ -1.49
CHD1-203ENST00000505657 ZNF561-AS1K7EIQ3 104 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 MAN2B1O00754 1011 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 PFKLP17858 780 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 BMP7P18075 431 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 NAT1P18440 290 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 CACNB2Q08289 660 aaPredicted RBP5.74□□□□□ -1.49
CHD1-203ENST00000505657 TUSC3Q13454 348 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 TARBP2Q15633 366 aaKnown RBP5.74□□□□□ -1.49
CHD1-203ENST00000505657 CR1LQ2VPA4 569 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 CYP4F22Q6NT55 531 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 C16orf59Q7L2K0 433 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 OVCH1Q7RTY7 1134 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 KIAA0907Q7Z7F0 614 aaPredicted RBP5.74□□□□□ -1.49
CHD1-203ENST00000505657 B3GNT8Q7Z7M8 397 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 FAM129CQ86XR2 697 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 PTRH1Q86Y79 214 aaKnown RBP5.74□□□□□ -1.49
CHD1-203ENST00000505657 IGSF22Q8N9C0 903 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 PHOSPHO1Q8TCT1 267 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 CPA5Q8WXQ8 436 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 DDX11Q96FC9 970 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 ZCCHC4Q9H5U6 513 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 DTLQ9NZJ0 730 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 RBPJLQ9UBG7 517 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 DSEQ9UL01 958 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 CNOT6Q9ULM6 557 aaKnown RBP5.74□□□□□ -1.49
CHD1-203ENST00000505657 WASF3Q9UPY6 502 aa5.74□□□□□ -1.49
CHD1-203ENST00000505657 TMA7Q9Y2S6 64 aaKnown RBP5.74□□□□□ -1.49
CHD1-203ENST00000505657 A0A0G2JLL6 359 aaPredicted RBP5.73□□□□□ -1.49
CHD1-203ENST00000505657 OPA1O60313 960 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 GLRX3O76003 335 aaKnown RBP5.73□□□□□ -1.49
CHD1-203ENST00000505657 LRG1P02750 347 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 ST5P78524 1137 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 FOXO4P98177 505 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 GPR19Q15760 415 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 PLEKHG4Q58EX7 1191 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 DALRD3Q5D0E6 543 aaKnown RBP5.73□□□□□ -1.49
CHD1-203ENST00000505657 CD300LDQ6UXZ3 194 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms