RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 MYOZ2Q9NPC6 264 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 FBXO28Q9NVF7 368 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 KIF5CO60282 957 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 ARHGAP25P42331 645 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 TGFB2P61812 414 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 MEA1Q16626 185 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 MAN2A1Q16706 1144 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 KIF4BQ2VIQ3 1234 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 SH2D4AQ9H788 454 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 REXO2Q9Y3B8 237 aaKnown RBP24.97■■□□□ 1.59
PCDH1-204ENST00000503492 MRFAP1Q9Y605 127 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 FRMD3A2A2Y4 597 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 GCOM1H8Y6P7 765 aaPredicted RBP24.96■■□□□ 1.59
PCDH1-204ENST00000503492 POLR2MP0CAP2 368 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 TSR1Q2NL82 804 aaKnown RBP24.96■■□□□ 1.59
PCDH1-204ENST00000503492 ARHGAP29Q52LW3 1261 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 HERC4Q5GLZ8 1057 aaPredicted RBP24.96■■□□□ 1.59
PCDH1-204ENST00000503492 FIGNQ5HY92 759 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 FAM160B2Q86V87 743 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 WDR18Q9BV38 432 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 PITPNM2Q9BZ72 1349 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 ZBED6P86452 979 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 SAMD1Q6SPF0 538 aaPredicted RBP24.96■■□□□ 1.59
PCDH1-204ENST00000503492 TEX2Q8IWB9 1127 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 DNM3Q9UQ16 869 aa24.96■■□□□ 1.59
PCDH1-204ENST00000503492 PABPC4Q13310 644 aaKnown RBP eCLIP24.95■■□□□ 1.59
PCDH1-204ENST00000503492 SYT2Q8N9I0 419 aaPredicted RBP24.95■■□□□ 1.59
PCDH1-204ENST00000503492 SIK3Q9Y2K2 1263 aa24.95■■□□□ 1.59
PCDH1-204ENST00000503492 EML1O00423 815 aa24.95■■□□□ 1.58
PCDH1-204ENST00000503492 ZBTB7AO95365 584 aa24.95■■□□□ 1.58
PCDH1-204ENST00000503492 KRT18P05783 430 aaKnown RBP24.95■■□□□ 1.58
PCDH1-204ENST00000503492 ASNSP08243 561 aa24.95■■□□□ 1.58
PCDH1-204ENST00000503492 ZNF569Q5MCW4 686 aa24.95■■□□□ 1.58
PCDH1-204ENST00000503492 MNS1Q8NEH6 495 aa24.95■■□□□ 1.58
PCDH1-204ENST00000503492 TAOK3Q9H2K8 898 aa24.95■■□□□ 1.58
PCDH1-204ENST00000503492 FEM1BQ9UK73 627 aa24.95■■□□□ 1.58
PCDH1-204ENST00000503492 MRPL11Q9Y3B7 192 aaKnown RBP24.95■■□□□ 1.58
PCDH1-204ENST00000503492 STK24Q9Y6E0 443 aa24.95■■□□□ 1.58
PCDH1-204ENST00000503492 A0A1W2PQJ5 194 aa24.94■■□□□ 1.58
PCDH1-204ENST00000503492 TADA3O75528 432 aa24.94■■□□□ 1.58
PCDH1-204ENST00000503492 FKBP3Q00688 224 aaKnown RBP24.94■■□□□ 1.58
PCDH1-204ENST00000503492 GIT2Q14161 759 aa24.94■■□□□ 1.58
PCDH1-204ENST00000503492 DALRD3Q5D0E6 543 aaKnown RBP24.94■■□□□ 1.58
PCDH1-204ENST00000503492 NELFCDQ8IXH7 590 aa24.94■■□□□ 1.58
PCDH1-204ENST00000503492 ZNF397Q8NF99 534 aaPredicted RBP24.94■■□□□ 1.58
PCDH1-204ENST00000503492 SCFD1Q8WVM8 642 aa24.94■■□□□ 1.58
PCDH1-204ENST00000503492 ERCC3P19447 782 aa24.94■■□□□ 1.58
PCDH1-204ENST00000503492 CYP4A11Q02928 519 aa24.94■■□□□ 1.58
PCDH1-204ENST00000503492 RASA3Q14644 834 aa24.94■■□□□ 1.58
PCDH1-204ENST00000503492 SLC30A10Q6XR72 485 aa24.94■■□□□ 1.58
PCDH1-204ENST00000503492 EIF2AK1Q9BQI3 630 aaKnown RBP24.94■■□□□ 1.58
PCDH1-204ENST00000503492 FER1L6Q2WGJ9 1857 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 PHF20L1A8MW92 1017 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 TRAF5O00463 557 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 UBXN2AP68543 259 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 LDHDQ86WU2 507 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 JDP2Q8WYK2 163 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 ZHX3Q9H4I2 956 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 EGFRP00533 1210 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 FBXO38Q6PIJ6 1188 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 POLR3CQ9BUI4 534 aaPredicted RBP24.93■■□□□ 1.58
PCDH1-204ENST00000503492 KCTD10Q9H3F6 313 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 EMILIN3Q9NT22 766 aa24.93■■□□□ 1.58
PCDH1-204ENST00000503492 SLC35F6Q8N357 371 aa24.92■■□□□ 1.58
PCDH1-204ENST00000503492 ZNF341Q9BYN7 854 aa24.92■■□□□ 1.58
PCDH1-204ENST00000503492 RGL1Q9NZL6 768 aa24.92■■□□□ 1.58
PCDH1-204ENST00000503492 COL4A3BPQ9Y5P4 624 aa24.92■■□□□ 1.58
PCDH1-204ENST00000503492 EPHB6O15197 1021 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 INPP5BP32019 993 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 REEP2Q9BRK0 252 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 ZNHIT6Q9NWK9 470 aaKnown RBP24.91■■□□□ 1.58
PCDH1-204ENST00000503492 ATAD5Q96QE3 1844 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 NFKBIEO00221 500 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 PTGER2P43116 358 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 HERVK_113P62684 666 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 PPP2R3AQ06190 1150 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 OTOP1Q7RTM1 612 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 UBXN4Q92575 508 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 IQCDQ96DY2 449 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 TEPSINQ96N21 525 aa24.91■■□□□ 1.58
PCDH1-204ENST00000503492 EFCAB8A8MWE9 144 aa24.9■■□□□ 1.58
PCDH1-204ENST00000503492 PSMD10O75832 226 aa24.9■■□□□ 1.58
PCDH1-204ENST00000503492 CASP5P51878 434 aa24.9■■□□□ 1.58
PCDH1-204ENST00000503492 ZFP91Q96JP5 570 aaPredicted RBP24.9■■□□□ 1.58
PCDH1-204ENST00000503492 FAM207AQ9NSI2 230 aaPredicted RBP24.9■■□□□ 1.58
PCDH1-204ENST00000503492 SLC5A5Q92911 643 aa24.9■■□□□ 1.58
PCDH1-204ENST00000503492 CEP63Q96MT8 703 aa24.9■■□□□ 1.58
PCDH1-204ENST00000503492 FEZ1Q99689 392 aa24.9■■□□□ 1.58
PCDH1-204ENST00000503492 NHEJ1Q9H9Q4 299 aaPredicted RBP24.9■■□□□ 1.58
PCDH1-204ENST00000503492 TRIM10Q9UDY6 481 aa24.9■■□□□ 1.58
PCDH1-204ENST00000503492 ZNF280AP59817 542 aaPredicted RBP24.89■■□□□ 1.58
PCDH1-204ENST00000503492 TNIP1Q15025 636 aa24.89■■□□□ 1.58
PCDH1-204ENST00000503492 LRCH2Q5VUJ6 765 aa24.89■■□□□ 1.58
PCDH1-204ENST00000503492 HSD17B14Q9BPX1 270 aa24.89■■□□□ 1.58
PCDH1-204ENST00000503492 BHMT2Q9H2M3 363 aa24.89■■□□□ 1.58
PCDH1-204ENST00000503492 MMRN2Q9H8L6 949 aa24.89■■□□□ 1.58
PCDH1-204ENST00000503492 KIF20AO95235 890 aa24.89■■□□□ 1.57
PCDH1-204ENST00000503492 CCDC40Q4G0X9 1142 aa24.89■■□□□ 1.57
PCDH1-204ENST00000503492 SFR1Q86XK3 245 aa24.89■■□□□ 1.57
PCDH1-204ENST00000503492 CCDC155Q8N6L0 562 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms