RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, human

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNC-208	ENST00000498724	ERGIC2	Q96RQ1	377 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	PLIN2	Q99541	437 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	DUSP9	Q99956	384 aa	Known RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	BRIP1	Q9BX63	1249 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	CCSER1	Q9C0I3	900 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	GOPC	Q9HD26	462 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	LUC7L	Q9NQ29	371 aa	Known RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	SH3GLB2	Q9NR46	395 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	AGPAT5	Q9NUQ2	364 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	RNF14	Q9UBS8	474 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	ABCF2	Q9UG63	623 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	SEPT9	Q9UHD8	586 aa	Predicted RBP	4.92	□□□□□ -1.62
TNC-208	ENST00000498724	PCDHA4	Q9UN74	947 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	CAPN6	Q9Y6Q1	641 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	CNTNAP4	Q9C0A0	1308 aa		4.92	□□□□□ -1.62
TNC-208	ENST00000498724	DLEC1	Q9Y238	1755 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	CYP2D7	A0A087X1C5	515 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	LOC102724159	A0A0B4J2E5	919 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	GOLGA6L7	A0A1B0GV03	622 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	GRID2IP	A4D2P6	1211 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	GOLGA6L10	A6NI86	522 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	RASSF10	A6NK89	507 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PP2D1	A8MPX8	630 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	ERVV-1	B6SEH8	477 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	ZNF263	O14978	683 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	MEFV	O15553	781 aa	Predicted RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PJA2	O43164	708 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	ZEB2	O60315	1214 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	HEXIM1	O94992	359 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	LCA5L	O95447	670 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PLEK	P08567	350 aa	Predicted RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	OR52Z1	P0C646	297 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PLCG1	P19174	1290 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	NR1D1	P20393	614 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	TM4SF1	P30408	202 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	HNRNPH3	P31942	346 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	GNAQ	P50148	359 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PPP4C	P60510	307 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	DYNLL1	P63167	89 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	TNNC1	P63316	161 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	MRPS25	P82663	173 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	AMPD3	Q01432	767 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	DDR1	Q08345	913 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	TROAP	Q12815	778 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PLCB4	Q15147	1175 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PWP2	Q15269	919 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PTGIS	Q16647	500 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	MAN2A1	Q16706	1144 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	CCDC152	Q4G0S7	254 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	CFAP221	Q4G0U5	840 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	VWA3B	Q502W6	1294 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	NAALADL2	Q58DX5	795 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	MIIP	Q5JXC2	388 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	LCE2D	Q5TA82	110 aa	Predicted RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	NAA35	Q5VZE5	725 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	ANKRD40	Q6AI12	368 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	GALNT17	Q6IS24	598 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	CNNM4	Q6P4Q7	775 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PDXDC1	Q6P996	788 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	INTS5	Q6P9B9	1019 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	KCNV1	Q6PIU1	500 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	TMED8	Q6PL24	325 aa	Predicted RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	BICDL1	Q6ZP65	573 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	RRAGA	Q7L523	313 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	CACNA2D4	Q7Z3S7	1137 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	KRT26	Q7Z3Y9	468 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	MAATS1	Q7Z4T9	603 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	NLRP14	Q86W24	1093 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	DZIP3	Q86Y13	1208 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	CD302	Q8IX05	232 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	MREG	Q8N565	214 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	SH2D3C	Q8N5H7	860 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	C4orf32	Q8N8J7	132 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PRPF38A	Q8NAV1	312 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	GIMAP7	Q8NHV1	300 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	WHAMM	Q8TF30	809 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	ZNF473	Q8WTR7	871 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	TAF4B	Q92750	862 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	WNT2B	Q93097	391 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	RNPC3	Q96LT9	517 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	ZIM3	Q96PE6	472 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PSMB7	Q99436	277 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	TSG101	Q99816	390 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	C7orf25	Q9BPX7	421 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	HINFP	Q9BQA5	517 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	PAGR1	Q9BTK6	254 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	EPN3	Q9H201	632 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	MMRN2	Q9H8L6	949 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	GDF3	Q9NR23	364 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	TCP11L1	Q9NUJ3	509 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	KBTBD4	Q9NVX7	518 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	SMARCAL1	Q9NZC9	954 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	RNF181	Q9P0P0	153 aa		4.91	□□□□□ -1.62
TNC-208	ENST00000498724	DMGDH	Q9UI17	866 aa	Known RBP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
TNC-208	ENST00000498724	DUSP10	Q9Y6W6	482 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms