RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 PMF1-BGLAPU3KQ54 211 aa6.98□□□□□ -1.29
SSR3-209ENST00000498205 CYP7B1O75881 506 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 FLT3P36888 993 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 AFF3P51826 1226 aaKnown RBP6.97□□□□□ -1.29
SSR3-209ENST00000498205 HTRA3P83110 453 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 CD300LDQ6UXZ3 194 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 C16orf86Q6ZW13 317 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 KCTD1Q719H9 257 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 TTLL6Q8N841 843 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 SMARCC2Q8TAQ2 1214 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 SLC7A14Q8TBB6 771 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 PWWP2AQ96N64 755 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 CELF4Q9BZC1 486 aaKnown RBP6.97□□□□□ -1.29
SSR3-209ENST00000498205 CATSPERZQ9NTU4 200 aa6.97□□□□□ -1.29
SSR3-209ENST00000498205 INTS7Q9NVH2 962 aaKnown RBP6.97□□□□□ -1.29
SSR3-209ENST00000498205 ASLP04424 464 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 GJA4P35212 333 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 IGFALSP35858 605 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 JAG1P78504 1218 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 FIGNQ5HY92 759 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 BRAPQ7Z569 592 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.96□□□□□ -1.3
SSR3-209ENST00000498205 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 LINC00482Q8N8I6 264 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 KRTAP9-2Q9BYQ4 174 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 TRIM39Q9HCM9 518 aa6.96□□□□□ -1.3
SSR3-209ENST00000498205 EPB41L4AQ9HCS5 686 aaPredicted RBP6.96□□□□□ -1.3
SSR3-209ENST00000498205 CCDC66A2RUB6 948 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 SLC27A2O14975 620 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 SMARCA5O60264 1052 aaPredicted RBP6.95□□□□□ -1.3
SSR3-209ENST00000498205 CDC45O75419 566 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 ASMTLO95671 621 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 PYGMP11217 842 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 MC3RP41968 323 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 LACTBP83111 547 aaPredicted RBP6.95□□□□□ -1.3
SSR3-209ENST00000498205 TEPPQ6URK8 271 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 TTLL7Q6ZT98 887 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 DDX53Q86TM3 631 aaKnown RBP6.95□□□□□ -1.3
SSR3-209ENST00000498205 LINC01356Q8N9X3 169 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 KYQ8NBH2 561 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 ARRDC4Q8NCT1 418 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 FNIP1Q8TF40 1166 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 TMEM209Q96SK2 561 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 IRF2BPLQ9H1B7 796 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 BCAS3Q9H6U6 928 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 SRPK3Q9UPE1 567 aa6.95□□□□□ -1.3
SSR3-209ENST00000498205 TCRBV16S1A1N1A0A5B0 115 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 ESYT3A0FGR9 886 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 SH3D21A4FU49 640 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 ENPP3O14638 875 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 NKRFO15226 690 aaKnown RBP eCLIP6.94□□□□□ -1.3
SSR3-209ENST00000498205 C8BP07358 591 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 ZSCAN22P10073 491 aaPredicted RBP6.94□□□□□ -1.3
SSR3-209ENST00000498205 COL6A2P12110 1019 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 LIMS1P48059 325 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 TUSC3Q13454 348 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 SAPCD2Q86UD0 394 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 C1QL4Q86Z23 238 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 FEZ1Q99689 392 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 MAGEC2Q9UBF1 373 aaPredicted RBP6.94□□□□□ -1.3
SSR3-209ENST00000498205 PLA2G2DQ9UNK4 145 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 PLAAQ9Y263 795 aa6.94□□□□□ -1.3
SSR3-209ENST00000498205 TMA7Q9Y2S6 64 aaKnown RBP6.94□□□□□ -1.3
SSR3-209ENST00000498205 RAPGEF3O95398 923 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 SRGAP2CP0DJJ0 459 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 FAHP16930 419 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 FZD5Q13467 585 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 ARHGAP44Q17R89 818 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 CR1LQ2VPA4 569 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 PAN2Q504Q3 1202 aaKnown RBP6.93□□□□□ -1.3
SSR3-209ENST00000498205 ARHGAP36Q6ZRI8 547 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 SCLYQ96I15 445 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 C11orf84Q9BUA3 381 aaPredicted RBP6.93□□□□□ -1.3
SSR3-209ENST00000498205 FANCLQ9NW38 375 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 NTMQ9P121 344 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 MRPL42Q9Y6G3 142 aaKnown RBP6.93□□□□□ -1.3
SSR3-209ENST00000498205 ATP23Q9Y6H3 246 aa6.93□□□□□ -1.3
SSR3-209ENST00000498205 SCRIBQ14160 1630 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 TLDC2A0PJX2 215 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
SSR3-209ENST00000498205 ZNF561-AS1K7EIQ3 104 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 CLASP2O75122 1294 aaKnown RBP6.92□□□□□ -1.3
SSR3-209ENST00000498205 RASGRP1O95267 797 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 PDE6AP16499 860 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 DNM2P50570 870 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 PABPC4Q13310 644 aaKnown RBP eCLIP6.92□□□□□ -1.36e-9■□□□□ 9.1
SSR3-209ENST00000498205 HHIPL2Q6UWX4 724 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 UBE2R2Q712K3 238 aaPredicted RBP6.92□□□□□ -1.3
SSR3-209ENST00000498205 SP8Q8IXZ3 490 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 CLEC4DQ8WXI8 215 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 ZBTB8AQ96BR9 441 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 CLIC6Q96NY7 704 aa6.92□□□□□ -1.3
SSR3-209ENST00000498205 ADAMTS20P59510 1910 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 OPA1O60313 960 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 CLSTN1O94985 981 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 LRG1P02750 347 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
SSR3-209ENST00000498205 CKMP06732 381 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 ITGA1P56199 1179 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 VASNQ6EMK4 673 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms