RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CDC23Q9UJX2 597 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 ATXN7L1Q9ULK2 861 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-224ENST00000497488 L1RE1Q9UN81 338 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 NPFFR2Q9Y5X5 522 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 ITIH6Q6UXX5 1313 aa7.25□□□□□ -1.25
BRCA1-224ENST00000497488 BAZ1BQ9UIG0 1483 aaKnown RBP7.24□□□□□ -1.25
BRCA1-224ENST00000497488 B3GALT2O43825 422 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 MBD4O95243 580 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 TBC1D8O95759 1140 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 PYGLP06737 847 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 CAPN3P20807 821 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 C5AR1P21730 350 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 PEX2P28328 305 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 FXR1P51114 621 aaKnown RBP eCLIP7.24□□□□□ -1.25
BRCA1-224ENST00000497488 RNF4P78317 190 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 AMPD2Q01433 879 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 ARHGAP44Q17R89 818 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 CYP26C1Q6V0L0 522 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 ANKRD23Q86SG2 305 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 SYT9Q86SS6 491 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 TTC30BQ8N4P2 665 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 CAMKK1Q8N5S9 505 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 SSH1Q8WYL5 1049 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 C1GALT1C1Q96EU7 318 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 MVB12AQ96EY5 273 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 TTC14Q96N46 770 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 ORAI2Q96SN7 254 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 ALG1Q9BT22 464 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 LRRC27Q9C0I9 530 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 RIC8AQ9NPQ8 531 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 ATP13A2Q9NQ11 1180 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 GPR27Q9NS67 375 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 GMPR2Q9P2T1 348 aaKnown RBP7.24□□□□□ -1.25
BRCA1-224ENST00000497488 NOC2LQ9Y3T9 749 aaKnown RBP7.24□□□□□ -1.25
BRCA1-224ENST00000497488 PCDHB12Q9Y5F1 795 aa7.24□□□□□ -1.25
BRCA1-224ENST00000497488 A0A087WV62 115 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 A0A1W2PRQ8 180 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 CCDC66A2RUB6 948 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 H7C1W4 665 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 K7ENM7 598 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 WNT9AO14904 365 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 AOC2O75106 756 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 SIN3BO75182 1162 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 VAMP4O75379 141 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 UBXN7O94888 489 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 CNOT4O95628 575 aaKnown RBP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 CST3P01034 146 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 BMP1P13497 986 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 ABCB4P21439 1286 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 ITGA6P23229 1130 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 CALRP27797 417 aaKnown RBP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 LSP1P33241 339 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 CAP2P40123 477 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 PIK3CBP42338 1070 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 MPP1Q00013 466 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 SCRN1Q12765 414 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 G3BP1Q13283 466 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 SLBPQ14493 270 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 TESK1Q15569 626 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 FAM47CQ5HY64 1035 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 WDR45BQ5MNZ6 344 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 RNF220Q5VTB9 566 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 PRAMEF13Q5VWM6 474 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 ZKSCAN2Q63HK3 967 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 TSHZ3Q63HK5 1081 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 ZNF787Q6DD87 383 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 LBX2Q6XYB7 198 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 TTLL7Q6ZT98 887 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 OTOP1Q7RTM1 612 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 TRIM46Q7Z4K8 759 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 OR8H2Q8N162 312 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 C2orf69Q8N8R5 385 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 PPP1R13LQ8WUF5 828 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 TTC9Q92623 222 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 KIAA1191Q96A73 305 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 VWCEQ96DN2 955 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 ZDHHC15Q96MV8 337 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 B3GNT5Q9BYG0 378 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 NUP62CLQ9H1M0 184 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 ALDH8A1Q9H2A2 487 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 CERS4Q9HA82 394 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 ALG13Q9NP73 1137 aaKnown RBP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 DMRT3Q9NQL9 472 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 ZNF277Q9NRM2 450 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 SMC4Q9NTJ3 1288 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 FBXL21Q9UKT6 434 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 CTDP1Q9Y5B0 961 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 PCDHA11Q9Y5I1 949 aa7.23□□□□□ -1.25
BRCA1-224ENST00000497488 COL17A1Q9UMD9 1497 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-224ENST00000497488 WIZO95785 1651 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 SOBPA7XYQ1 873 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 MSCO60682 206 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 ITIH2P19823 946 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 AGXTP21549 392 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 FGFR3P22607 806 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 TNFSF4P23510 183 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 DNM2P50570 870 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 CACNB3P54284 484 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 SMAD3P84022 425 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms