RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 PPP4R3CPQ6ZMV5 832 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 GLIS3Q8NEA6 775 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 DEF6Q9H4E7 631 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 TRIM10Q9UDY6 481 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 NKRFO15226 690 aaKnown RBP eCLIP12.26□□□□□ -0.45
CMSS1-208ENST00000496116 RPA1P27694 616 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 CIITAP33076 1130 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 STAT2P52630 851 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 SLC12A3P55017 1021 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 SNAP25P60880 206 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 NCAPH2Q6IBW4 605 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 TRAPPC11Q7Z392 1133 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 CACNA2D4Q7Z3S7 1137 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 CATSPER3Q86XQ3 398 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 TXLNBQ8N3L3 684 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 MSANTD4Q8NCY6 345 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 NUCKS1Q9H1E3 243 aaKnown RBP12.26□□□□□ -0.45
CMSS1-208ENST00000496116 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 DNM3Q9UQ16 869 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 PCDHA2Q9Y5H9 948 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 SAR1BQ9Y6B6 198 aa12.26□□□□□ -0.45
CMSS1-208ENST00000496116 ANO9A1A5B4 782 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 FRMD3A2A2Y4 597 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 POTEFA5A3E0 1075 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 PIK3CDO00329 1044 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 ERLIN1O75477 346 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 SEC31AO94979 1220 aaKnown RBP12.25□□□□□ -0.45
CMSS1-208ENST00000496116 POTEIP0CG38 1075 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 ZNF76P36508 570 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 STAT3P40763 770 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 SPIRE1Q08AE8 756 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 POTEGQ6S5H5 508 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 POTEEQ6S8J3 1075 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 KCTD17Q8N5Z5 321 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 TBC1D7Q9P0N9 293 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 HDAC9Q9UKV0 1011 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 PRR12Q9ULL5 1215 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 PSME4Q14997 1843 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 YDJCA8MPS7 323 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 FAM86B1E9PN63 330 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 CYP3A4P08684 503 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 FAM86B2P0C5J1 330 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 MARSP56192 900 aaKnown RBP12.25□□□□□ -0.45
CMSS1-208ENST00000496116 SLC15A2Q16348 729 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 EDRF1Q3B7T1 1238 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 PAPD7Q5XG87 772 aaKnown RBP12.25□□□□□ -0.45
CMSS1-208ENST00000496116 RRAGAQ7L523 313 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 SYT2Q8N9I0 419 aaPredicted RBP12.25□□□□□ -0.45
CMSS1-208ENST00000496116 HNRNPLLQ8WVV9 542 aaKnown RBP12.25□□□□□ -0.45
CMSS1-208ENST00000496116 SECISBP2LQ93073 1101 aaKnown RBP12.25□□□□□ -0.45
CMSS1-208ENST00000496116 LENG9Q96B70 501 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 RPGRIP1Q96KN7 1286 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 UIMC1Q96RL1 719 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 IFIH1Q9BYX4 1025 aaKnown RBP12.25□□□□□ -0.45
CMSS1-208ENST00000496116 ZHX3Q9H4I2 956 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 ANKZF1Q9H8Y5 726 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 FAM184BQ9ULE4 1060 aa12.25□□□□□ -0.45
CMSS1-208ENST00000496116 TNS1Q9HBL0 1735 aaKnown RBP12.24□□□□□ -0.45
CMSS1-208ENST00000496116 A0A1W2PRG0 241 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 LRRC53A6NM62 1247 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 TCP10L2B9ZVM9 353 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 AKR1B10O60218 316 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 TBC1D8O95759 1140 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 KIF11P52732 1056 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 CKAP4Q07065 602 aaKnown RBP12.24□□□□□ -0.45
CMSS1-208ENST00000496116 NELFCDQ8IXH7 590 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 SPICE1Q8N0Z3 855 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 OGFOD1Q8N543 542 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 TRIM58Q8NG06 486 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 SCFD1Q8WVM8 642 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 PURBQ96QR8 312 aaKnown RBP12.24□□□□□ -0.45
CMSS1-208ENST00000496116 P2RX7Q99572 595 aaKnown RBP12.24□□□□□ -0.45
CMSS1-208ENST00000496116 LACRTQ9GZZ8 138 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 GBP3Q9H0R5 595 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 ARHGAP20Q9P2F6 1191 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 RAB21Q9UL25 225 aa12.24□□□□□ -0.45
CMSS1-208ENST00000496116 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.24□□□□□ -0.45
CMSS1-208ENST00000496116 NPHP3-ACAD11A0A0J9YXS1 232 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 ENC1O14682 589 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 CETN3O15182 167 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 EPHB6O15197 1021 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 MSH4O15457 936 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 C21orf2O43822 256 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 LCA5LO95447 670 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 ATP1A1P05023 1023 aaKnown RBP12.23□□□□□ -0.45
CMSS1-208ENST00000496116 RXRBP28702 533 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 HOXA13P31271 388 aaPredicted RBP12.23□□□□□ -0.45
CMSS1-208ENST00000496116 EPS15P42566 896 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 FAM193AP78312 1265 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 JAG1P78504 1218 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 CYP27A1Q02318 531 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 CACNB1Q02641 598 aaPredicted RBP12.23□□□□□ -0.45
CMSS1-208ENST00000496116 RAD51AP2Q09MP3 1159 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 ADAM9Q13443 819 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 ARSHQ5FYA8 562 aa12.23□□□□□ -0.45
CMSS1-208ENST00000496116 RSBN1LQ6PCB5 846 aaPredicted RBP12.23□□□□□ -0.45
CMSS1-208ENST00000496116 FAM151AQ8WW52 585 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms