RNA–Protein interactions for RNA: ENST00000495973.5

TBRG4-217, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 1 (best)

Gene TBRG4, Length 3,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-217ENST00000495973 CXCL9Q07325 125 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 TCERG1LQ5VWI1 586 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 CACNA2D4Q7Z3S7 1137 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 ZNF397Q8NF99 534 aaPredicted RBP12.37□□□□□ -0.43
TBRG4-217ENST00000495973 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 RHOXF2Q9BQY4 288 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 NAA15Q9BXJ9 866 aaKnown RBP12.37□□□□□ -0.43
TBRG4-217ENST00000495973 SRGAP2O75044 1071 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 PRPF6O94906 941 aaKnown RBP12.37□□□□□ -0.43
TBRG4-217ENST00000495973 GCFC2P16383 781 aaKnown RBP12.37□□□□□ -0.43
TBRG4-217ENST00000495973 IRX5P78411 483 aaPredicted RBP12.37□□□□□ -0.43
TBRG4-217ENST00000495973 TDRD12Q587J7 1177 aaKnown RBP12.37□□□□□ -0.43
TBRG4-217ENST00000495973 MIIPQ5JXC2 388 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 SAMD7Q7Z3H4 446 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 ZNF507Q8TCN5 953 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 MTMR8Q96EF0 704 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 NRXN2Q9P2S2 1712 aa12.37□□□□□ -0.43
TBRG4-217ENST00000495973 EML1O00423 815 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 OPLAHO14841 1288 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 CLIC2O15247 247 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 NAP1L1P55209 391 aaKnown RBP12.36□□□□□ -0.43
TBRG4-217ENST00000495973 TMEM119Q4V9L6 283 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 CCDC65Q8IXS2 484 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 JDP2Q8WYK2 163 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 DNAJC19Q96DA6 116 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 GOPCQ9HD26 462 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 ABCB11O95342 1321 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 VWA3BQ502W6 1294 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 DCAF17Q5H9S7 520 aaPredicted RBP12.36□□□□□ -0.43
TBRG4-217ENST00000495973 WDR59Q6PJI9 974 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 SFR1Q86XK3 245 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 ST7Q9NRC1 585 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 DNM3Q9UQ16 869 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 ITIH6Q6UXX5 1313 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 CTAGE9A4FU28 777 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 CYP11B2P19099 503 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 BAG6P46379 1132 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 CENPPQ6IPU0 288 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 RTKN2Q8IZC4 609 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 NT5C3AQ9H0P0 336 aa12.36□□□□□ -0.43
TBRG4-217ENST00000495973 NHEJ1Q9H9Q4 299 aaPredicted RBP12.36□□□□□ -0.43
TBRG4-217ENST00000495973 RASSF10A6NK89 507 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 WNT10BO00744 389 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 ALAS1P13196 640 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 CLCN6P51797 869 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 TRIM14Q14142 442 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 RASA3Q14644 834 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 FAM151AQ8WW52 585 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 GMCL1Q96IK5 515 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 CCDC42Q96M95 316 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 REXO2Q9Y3B8 237 aaKnown RBP12.35□□□□□ -0.43
TBRG4-217ENST00000495973 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 GCNT3O95395 438 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 MYBP10242 640 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 KCNA1Q09470 495 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 LRCH2Q5VUJ6 765 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 GMCL1P1Q8NEA9 526 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 ERMNQ8TAM6 284 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 CCDC51Q96ER9 411 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 REEP2Q9BRK0 252 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 KCNMB3Q9NPA1 279 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 CAPN11Q9UMQ6 739 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 MRFAP1Q9Y605 127 aa12.35□□□□□ -0.43
TBRG4-217ENST00000495973 PVALEFA0A1B0GWK0 134 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 GCOM1H8Y6P7 765 aaPredicted RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 AKR1B10O60218 316 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 TADA3O75528 432 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 POLR2MP0CAP2 368 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 USP11P51784 963 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 PTPROQ16827 1216 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 ARSHQ5FYA8 562 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 HAUS3Q68CZ6 603 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 GUF1Q8N442 669 aaKnown RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 DYDC2Q96IM9 177 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 LACRTQ9GZZ8 138 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.434e-7■■■■■ 63.6
TBRG4-217ENST00000495973 ZNRF3Q9ULT6 936 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 KDM3AQ9Y4C1 1321 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 RCCD1A6NED2 376 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 LRRC53A6NM62 1247 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 ADAM9Q13443 819 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 DNAAF5Q86Y56 855 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 SLFN12Q8IYM2 578 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 JAKMIP2Q96AA8 810 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 PURBQ96QR8 312 aaKnown RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 EIF2AK1Q9BQI3 630 aaKnown RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 RUSC1Q9BVN2 902 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 HERC5Q9UII4 1024 aaKnown RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 TBCAO75347 108 aaKnown RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 KCNA3P22001 575 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 INPP5BP32019 993 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 MRPS25P82663 173 aaKnown RBP12.34□□□□□ -0.43
TBRG4-217ENST00000495973 SP4Q02446 784 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 AP3B2Q13367 1082 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 BANK1Q8NDB2 785 aa12.34□□□□□ -0.43
TBRG4-217ENST00000495973 ETNPPLQ8TBG4 499 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms