RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 RNF180Q86T96 592 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 C1QL4Q86Z23 238 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 IFNL3Q8IZI9 196 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 AHI1Q8N157 1196 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 MAGEB10Q96LZ2 347 aaPredicted RBP8.16□□□□□ -1.1
CCDC39-207ENST00000495817 TARS2Q9BW92 718 aaKnown RBP8.16□□□□□ -1.1
CCDC39-207ENST00000495817 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 RXFP1Q9HBX9 757 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 FAN1Q9Y2M0 1017 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 NPTXRO95502 500 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 APPP05067 770 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 GRK2P25098 689 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 CFPP27918 469 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 GRK3P35626 688 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 CAP1Q01518 475 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 MIB1Q86YT6 1006 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 SIAH1Q8IUQ4 282 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 SCLYQ96I15 445 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 ALG1Q9BT22 464 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 PCDH18Q9HCL0 1135 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 PALD1Q9ULE6 856 aa8.15□□□□□ -1.1
CCDC39-207ENST00000495817 B4E1Z4 1266 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 HGSO14964 777 aaPredicted RBP8.14□□□□□ -1.11
CCDC39-207ENST00000495817 SGSM2O43147 1006 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 MSCO60682 206 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 NCKAP1LP55160 1127 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 STEAP3Q658P3 488 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 CNNM4Q6P4Q7 775 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 KCNT2Q6UVM3 1135 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 ETV3LQ6ZN32 361 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 FGD2Q7Z6J4 655 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 B3GNT8Q7Z7M8 397 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 FAM129CQ86XR2 697 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 PHOSPHO1Q8TCT1 267 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCDC39-207ENST00000495817 TYW1Q9NV66 732 aaKnown RBP8.14□□□□□ -1.11
CCDC39-207ENST00000495817 ATP8A1Q9Y2Q0 1164 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 SIT1Q9Y3P8 196 aa8.14□□□□□ -1.11
CCDC39-207ENST00000495817 ASXL2Q76L83 1435 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 TCRBV16S1A1N1A0A5B0 115 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 KRIT1O00522 736 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 RAB11FIP3O75154 756 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 POU3F3P20264 500 aaPredicted RBP8.13□□□□□ -1.11
CCDC39-207ENST00000495817 IGFALSP35858 605 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 FLT3P36888 993 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 CACNB2Q08289 660 aaPredicted RBP8.13□□□□□ -1.11
CCDC39-207ENST00000495817 CT47A1Q5JQC4 288 aaPredicted RBP8.13□□□□□ -1.11
CCDC39-207ENST00000495817 TCERG1LQ5VWI1 586 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 CNKSR3Q6P9H4 555 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 TMEFF1Q8IYR6 380 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 NGRNQ9NPE2 291 aaKnown RBP8.13□□□□□ -1.11
CCDC39-207ENST00000495817 NUB1Q9Y5A7 615 aa8.13□□□□□ -1.11
CCDC39-207ENST00000495817 TNPO3Q9Y5L0 923 aaKnown RBP8.13□□□□□ -1.11
CCDC39-207ENST00000495817 FAM83GA6ND36 823 aa8.12□□□□□ -1.11
CCDC39-207ENST00000495817 OPA1O60313 960 aa8.12□□□□□ -1.11
CCDC39-207ENST00000495817 CRTAMO95727 393 aa8.12□□□□□ -1.11
CCDC39-207ENST00000495817 FZD5Q13467 585 aa8.12□□□□□ -1.11
CCDC39-207ENST00000495817 MILR1Q7Z6M3 343 aa8.12□□□□□ -1.11
CCDC39-207ENST00000495817 ZC3H18Q86VM9 953 aaKnown RBP8.12□□□□□ -1.11
CCDC39-207ENST00000495817 FAM126BQ8IXS8 530 aa8.12□□□□□ -1.11
CCDC39-207ENST00000495817 DACT3Q96B18 629 aaPredicted RBP8.12□□□□□ -1.11
CCDC39-207ENST00000495817 METTL14Q9HCE5 456 aaKnown RBP8.12□□□□□ -1.11
CCDC39-207ENST00000495817 DDX56Q9NY93 547 aaKnown RBP8.12□□□□□ -1.11
CCDC39-207ENST00000495817 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
CCDC39-207ENST00000495817 TRAF6Q9Y4K3 522 aa8.12□□□□□ -1.11
CCDC39-207ENST00000495817 PCDHB4Q9Y5E5 795 aa8.12□□□□□ -1.11
CCDC39-207ENST00000495817 FAM47E-STBD1D6RA91 191 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 TADA3O75528 432 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 SOD2P04179 222 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 ATF2P15336 505 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 NFKB2Q00653 900 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 SPIRE1Q08AE8 756 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 DDX46Q7L014 1031 aaKnown RBP8.11□□□□□ -1.11
CCDC39-207ENST00000495817 AFAP1L2Q8N4X5 818 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 IRF2BPLQ9H1B7 796 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 SMOC1Q9H4F8 434 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 EPB41L4AQ9HCS5 686 aaPredicted RBP8.11□□□□□ -1.11
CCDC39-207ENST00000495817 SLC6A20Q9NP91 592 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 MCM8Q9UJA3 840 aa8.11□□□□□ -1.11
CCDC39-207ENST00000495817 WNT9AO14904 365 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 RASGRP1O95267 797 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 ZSCAN22P10073 491 aaPredicted RBP8.1□□□□□ -1.11
CCDC39-207ENST00000495817 CYP2C8P10632 490 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 CPEP16870 476 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 MC3RP41968 323 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 AFF3P51826 1226 aaKnown RBP8.1□□□□□ -1.11
CCDC39-207ENST00000495817 FOXO4P98177 505 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 GUCY1A3Q02108 690 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 PAK1Q13153 545 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 UBE2R2Q712K3 238 aaPredicted RBP8.1□□□□□ -1.11
CCDC39-207ENST00000495817 MTDHQ86UE4 582 aaKnown RBP8.1□□□□□ -1.11
CCDC39-207ENST00000495817 TRIM48Q8IWZ4 208 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 PWWP2AQ96N64 755 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 ORAI3Q9BRQ5 295 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 BCAS3Q9H6U6 928 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 MYOTQ9UBF9 498 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 PCDHA9Q9Y5H5 950 aa8.1□□□□□ -1.11
CCDC39-207ENST00000495817 ARVCFO00192 962 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 LIMS1P48059 325 aa8.09□□□□□ -1.11
CCDC39-207ENST00000495817 NEK4P51957 841 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms