RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SUPT20HL2P0C7V6 817 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 NFRKBQ6P4R8 1299 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 CCDC83Q8IWF9 413 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 CYP2W1Q8TAV3 490 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 PPP1R13LQ8WUF5 828 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 BADQ92934 168 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 GDF15Q99988 308 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 SDF4Q9BRK5 362 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 UBE2OQ9C0C9 1292 aaKnown RBP18.15■□□□□ 0.5
LIME1-209ENST00000494776 TRPV6Q9H1D0 765 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 KCNJ14Q9UNX9 436 aa18.15■□□□□ 0.5
LIME1-209ENST00000494776 MYH7BA7E2Y1 1941 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 B4GALT4O60513 344 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 CYP3A4P08684 503 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 KCNA2P16389 499 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 PSEN2P49810 448 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 MFSD10Q14728 455 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 PLA2G4DQ86XP0 818 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 C7orf31Q8N865 590 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 DAGLBQ8NCG7 672 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 NSUN7Q8NE18 718 aaKnown RBP18.14■□□□□ 0.49
LIME1-209ENST00000494776 KAT2BQ92831 832 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 TBC1D32Q96NH3 1257 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 GPR20Q99678 358 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 SH2B1Q9NRF2 756 aaPredicted RBP18.14■□□□□ 0.49
LIME1-209ENST00000494776 NOD1Q9Y239 953 aa18.14■□□□□ 0.49
LIME1-209ENST00000494776 MEIS1O00470 390 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 CD4P01730 458 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 ARP10275 920 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 HOXD8P13378 290 aaPredicted RBP18.13■□□□□ 0.49
LIME1-209ENST00000494776 PTPN11Q06124 597 aaPredicted RBP18.13■□□□□ 0.49
LIME1-209ENST00000494776 TRIM29Q14134 588 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 KIAA0753Q2KHM9 967 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 UTP14CQ5TAP6 766 aaKnown RBP18.13■□□□□ 0.49
LIME1-209ENST00000494776 NIPA1Q7RTP0 329 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 IL27Q8NEV9 243 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 PHF20Q9BVI0 1012 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 PPP1R12CQ9BZL4 782 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 BRMS1Q9HCU9 246 aa18.13■□□□□ 0.49
LIME1-209ENST00000494776 TRMT13Q9NUP7 481 aaKnown RBP18.13■□□□□ 0.49
LIME1-209ENST00000494776 TRIOBPQ9H2D6 2365 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 FAM86B1E9PN63 330 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 JAK2O60674 1132 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 F2P00734 622 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 TIMP1P01033 207 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 LGALS2P05162 132 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 FAM86B2P0C5J1 330 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 FDPSP14324 419 aaKnown RBP18.12■□□□□ 0.49
LIME1-209ENST00000494776 BMP8BP34820 402 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 FOSBP53539 338 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 SETQ01105 290 aaPredicted RBP18.12■□□□□ 0.49
LIME1-209ENST00000494776 KRT25Q7Z3Z0 450 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 TBCKQ8TEA7 893 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 SEPT1Q8WYJ6 367 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 BACH2Q9BYV9 841 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 HIPK3Q9H422 1215 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 AGO4Q9HCK5 861 aaKnown RBP18.12■□□□□ 0.49
LIME1-209ENST00000494776 JPH1Q9HDC5 661 aaPredicted RBP18.12■□□□□ 0.49
LIME1-209ENST00000494776 GJB4Q9NTQ9 266 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 SLC9A2Q9UBY0 812 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 TBX21Q9UL17 535 aa18.12■□□□□ 0.49
LIME1-209ENST00000494776 CCDC194A0A1B0GVG4 234 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 H3BRB1 525 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 ITGB8P26012 769 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 TCF7P36402 384 aaPredicted RBP18.11■□□□□ 0.49
LIME1-209ENST00000494776 USP11P51784 963 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 NONOQ15233 471 aaKnown RBP eCLIP18.11■□□□□ 0.49
LIME1-209ENST00000494776 PTGISQ16647 500 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 PRR16Q569H4 304 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 CRYGNQ8WXF5 182 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 LLPHQ9BRT6 129 aaKnown RBP18.11■□□□□ 0.49
LIME1-209ENST00000494776 ZNF577Q9BSK1 485 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 C16orf70Q9BSU1 422 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 TUT1Q9H6E5 874 aaKnown RBP18.11■□□□□ 0.49
LIME1-209ENST00000494776 HDAC6Q9UBN7 1215 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 TCEAL9Q9UHQ7 104 aa18.11■□□□□ 0.49
LIME1-209ENST00000494776 ZNF215Q9UL58 517 aaPredicted RBP18.11■□□□□ 0.49
LIME1-209ENST00000494776 NFASCO94856 1347 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 DDX39AO00148 427 aaKnown RBP18.1■□□□□ 0.49
LIME1-209ENST00000494776 CYP2C9P11712 490 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 KRT2P35908 639 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 FXR1P51114 621 aaKnown RBP eCLIP18.1■□□□□ 0.49
LIME1-209ENST00000494776 FPGSQ05932 587 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 ST3GAL1Q11201 340 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 SESTD1Q86VW0 696 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 TMEM199Q8N511 208 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 UIMC1Q96RL1 719 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 PRO3102Q9H379 93 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 TELO2Q9Y4R8 837 aa18.1■□□□□ 0.49
LIME1-209ENST00000494776 IGLV3-22A0A075B6J6 115 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 A0A1W2PPC1 479 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 M0R2N6 131 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 HAS3O00219 553 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 IPO5O00410 1097 aaKnown RBP18.09■□□□□ 0.49
LIME1-209ENST00000494776 CIITAP33076 1130 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 CYP2C18P33260 490 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 HMGN5P82970 282 aaKnown RBP18.09■□□□□ 0.49
LIME1-209ENST00000494776 ITGB3BPQ13352 177 aaPredicted RBP18.09■□□□□ 0.49
LIME1-209ENST00000494776 NPY5RQ15761 445 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 GDF6Q6KF10 455 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms