RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 ARHGAP4P98171 946 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 PPARDQ03181 441 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.21
PHF3-205ENST00000494284 CEP112Q8N8E3 955 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 PIGOQ8TEQ8 1089 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 CCDC51Q96ER9 411 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 THAP9Q9H5L6 903 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 RGS17Q9UGC6 210 aaPredicted RBP13.77□□□□□ -0.21
PHF3-205ENST00000494284 CAPN11Q9UMQ6 739 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 BCS1LQ9Y276 419 aa13.77□□□□□ -0.21
PHF3-205ENST00000494284 EML1O00423 815 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 EEF1GP26641 437 aaKnown RBP13.76□□□□□ -0.21
PHF3-205ENST00000494284 DNM2P50570 870 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 NBPF9Q3BBW0 867 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 TBC1D10BQ4KMP7 808 aaPredicted RBP13.76□□□□□ -0.21
PHF3-205ENST00000494284 ARSHQ5FYA8 562 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 RRAGAQ7L523 313 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 GPBP1Q86WP2 473 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 CATSPER3Q86XQ3 398 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
PHF3-205ENST00000494284 DHTKD1Q96HY7 919 aaPredicted RBP13.76□□□□□ -0.21
PHF3-205ENST00000494284 IDI2Q9BXS1 227 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 DEF6Q9H4E7 631 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 PANK4Q9NVE7 773 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
PHF3-205ENST00000494284 ASTN2O75129 1339 aaPredicted RBP13.76□□□□□ -0.21
PHF3-205ENST00000494284 NAP1L1P55209 391 aaKnown RBP13.76□□□□□ -0.21
PHF3-205ENST00000494284 RNASE9P60153 205 aaKnown RBP13.76□□□□□ -0.21
PHF3-205ENST00000494284 UNC13DQ70J99 1090 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 LENG9Q96B70 501 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 CCDC42Q96M95 316 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 TTYH3Q9C0H2 523 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 PRR12Q9ULL5 1215 aa13.76□□□□□ -0.21
PHF3-205ENST00000494284 GREB1LQ9C091 1923 aaPredicted RBP13.75□□□□□ -0.21
PHF3-205ENST00000494284 NCK2O43639 380 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 BUB1O43683 1085 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 IPO7O95373 1038 aaKnown RBP13.75□□□□□ -0.21
PHF3-205ENST00000494284 PLA2G4BP0C869 781 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 C2orf54Q08AI8 447 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 TMEM119Q4V9L6 283 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 BEND6Q5SZJ8 279 aaPredicted RBP13.75□□□□□ -0.21
PHF3-205ENST00000494284 CNNM4Q6P4Q7 775 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 CCDC47Q96A33 483 aaKnown RBP13.75□□□□□ -0.21
PHF3-205ENST00000494284 DNAJC7Q99615 494 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 EHD4Q9H223 541 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 PDE2AO00408 941 aaPredicted RBP13.75□□□□□ -0.21
PHF3-205ENST00000494284 MOCS3O95396 460 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 BMP3P12645 472 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 DPEP1P16444 411 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 CTTNQ14247 550 aaKnown RBP13.75□□□□□ -0.21
PHF3-205ENST00000494284 HERC4Q5GLZ8 1057 aaPredicted RBP13.75□□□□□ -0.21
PHF3-205ENST00000494284 PPP4R3AQ6IN85 833 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 CENPPQ6IPU0 288 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.75□□□□□ -0.21
PHF3-205ENST00000494284 FBXO11Q86XK2 927 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
PHF3-205ENST00000494284 CAPN6Q9Y6Q1 641 aa13.75□□□□□ -0.21
PHF3-205ENST00000494284 CCDC151A5D8V7 595 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 DDX39AO00148 427 aaKnown RBP13.74□□□□□ -0.21
PHF3-205ENST00000494284 TRAF5O00463 557 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 SYDE2Q5VT97 1194 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 LRRC55Q6ZSA7 311 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 CCDC17Q96LX7 622 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 NYAP2Q9P242 653 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 SAR1BQ9Y6B6 198 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 LRRC53A6NM62 1247 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 LRRIQ3A6PVS8 624 aaPredicted RBP13.74□□□□□ -0.21
PHF3-205ENST00000494284 AMPD3Q01432 767 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 AMPD2Q01433 879 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 GFPT1Q06210 699 aaPredicted RBP13.74□□□□□ -0.21
PHF3-205ENST00000494284 SPIRE1Q08AE8 756 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 PRAMEF18Q5VWM3 479 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 PURBQ96QR8 312 aaKnown RBP13.74□□□□□ -0.21
PHF3-205ENST00000494284 DHX36Q9H2U1 1008 aaKnown RBP13.74□□□□□ -0.21
PHF3-205ENST00000494284 NDST4Q9H3R1 872 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 SERPINA10Q9UK55 444 aa13.74□□□□□ -0.21
PHF3-205ENST00000494284 ZNF646O15015 1829 aaPredicted RBP13.73□□□□□ -0.21
PHF3-205ENST00000494284 MSH4O15457 936 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 AKR1B10O60218 316 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 KRT18P05783 430 aaKnown RBP13.73□□□□□ -0.21
PHF3-205ENST00000494284 CYP11B2P19099 503 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 SLC7A5Q01650 507 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
PHF3-205ENST00000494284 TRIM14Q14142 442 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 TDRD12Q587J7 1177 aaKnown RBP13.73□□□□□ -0.21
PHF3-205ENST00000494284 MKL1Q969V6 931 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 AMNQ9BXJ7 453 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 KCNMB3Q9NPA1 279 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 ARHGAP20Q9P2F6 1191 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 FAN1Q9Y2M0 1017 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 SPATA31C1P0DKV0 1188 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 MYBL2P10244 700 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 EIF4A3P38919 411 aaKnown RBP13.73□□□□□ -0.21
PHF3-205ENST00000494284 HNRNPH2P55795 449 aaKnown RBP13.73□□□□□ -0.21
PHF3-205ENST00000494284 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
PHF3-205ENST00000494284 MAEAQ7L5Y9 396 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms