RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 K7ELQ4 463 aaPredicted RBP14.04□□□□□ -0.16
UPF3A-210ENST00000493727 ZBTB43O43298 467 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 PLA2G6O60733 806 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 STK3Q13188 491 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 GRIN2CQ14957 1233 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 TKFCQ3LXA3 575 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 ANKRD33Q7Z3H0 272 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 RAB11FIP4Q86YS3 637 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 ZNF654Q8IZM8 581 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 LENG1Q96BZ8 264 aaPredicted RBP14.04□□□□□ -0.16
UPF3A-210ENST00000493727 CDK15Q96Q40 435 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 TMEM47Q9BQJ4 181 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 SLKQ9H2G2 1235 aaPredicted RBP14.04□□□□□ -0.16
UPF3A-210ENST00000493727 SENP2Q9HC62 589 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 RAVER2Q9HCJ3 691 aaKnown RBP14.04□□□□□ -0.16
UPF3A-210ENST00000493727 SH2B1Q9NRF2 756 aaPredicted RBP14.04□□□□□ -0.16
UPF3A-210ENST00000493727 TPCN1Q9ULQ1 816 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 ISY1Q9ULR0 285 aaKnown RBP14.04□□□□□ -0.16
UPF3A-210ENST00000493727 RIPK3Q9Y572 518 aa14.04□□□□□ -0.16
UPF3A-210ENST00000493727 BDP1A6H8Y1 2624 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 GOLGA8AA7E2F4 631 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 ZBBXA8MT70 800 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 J3QL48 77 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 PQBP1O60828 265 aaKnown RBP14.03□□□□□ -0.16
UPF3A-210ENST00000493727 DUSP11O75319 330 aaKnown RBP14.03□□□□□ -0.16
UPF3A-210ENST00000493727 DDAH1O94760 285 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 HSP90AA1P07900 732 aaKnown RBP14.03□□□□□ -0.16
UPF3A-210ENST00000493727 FBXO45P0C2W1 286 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 SMPD1P17405 629 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 SLC1A4P43007 532 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 METAP2P50579 478 aaKnown RBP eCLIP14.03□□□□□ -0.16
UPF3A-210ENST00000493727 FPGSQ05932 587 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 FAAP100Q0VG06 881 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 IKQ13123 557 aaPredicted RBP14.03□□□□□ -0.16
UPF3A-210ENST00000493727 RCSD1Q6JBY9 416 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 APOA5Q6Q788 366 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 ADAM32Q8TC27 787 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 ANKS1AQ92625 1134 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 POM121Q96HA1 1249 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 TOX2Q96NM4 488 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 MYL10Q9BUA6 226 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 ABHD16BQ9H3Z7 469 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 SPC25Q9HBM1 224 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 BRPF3Q9ULD4 1205 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 GBF1Q92538 1859 aa14.03□□□□□ -0.16
UPF3A-210ENST00000493727 SYNRGQ9UMZ2 1314 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 TMEM232C9JQI7 657 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 SNAI1O95863 264 aaPredicted RBP14.02□□□□□ -0.17
UPF3A-210ENST00000493727 CALM1P0DP23 149 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 CALM2P0DP24 149 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 CALM3P0DP25 149 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 RAG1P15918 1043 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 RXRAP19793 462 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 CCSAPQ6IQ19 270 aaPredicted RBP14.02□□□□□ -0.17
UPF3A-210ENST00000493727 ZBTB33Q86T24 672 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 CCDC144CPQ8IYA2 1237 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 PCSK9Q8NBP7 692 aaKnown RBP14.02□□□□□ -0.17
UPF3A-210ENST00000493727 CHMP4CQ96CF2 233 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 ZNF274Q96GC6 653 aaPredicted RBP14.02□□□□□ -0.17
UPF3A-210ENST00000493727 TMX3Q96JJ7 454 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 ACAD9Q9H845 621 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 ZHX1Q9UKY1 873 aaPredicted RBP14.02□□□□□ -0.17
UPF3A-210ENST00000493727 TBX21Q9UL17 535 aa14.02□□□□□ -0.17
UPF3A-210ENST00000493727 MROH7Q68CQ1 1323 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.01□□□□□ -0.17
UPF3A-210ENST00000493727 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.01□□□□□ -0.17
UPF3A-210ENST00000493727 DCDC2CA8MYV0 355 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 CST5P28325 142 aaPredicted RBP14.01□□□□□ -0.17
UPF3A-210ENST00000493727 PDIA3P30101 505 aaKnown RBP14.01□□□□□ -0.17
UPF3A-210ENST00000493727 CCT2P78371 535 aaKnown RBP14.01□□□□□ -0.17
UPF3A-210ENST00000493727 ACVR2BQ13705 512 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 ME3Q16798 604 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 RTN1Q16799 776 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 ARMCX2Q7L311 632 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 CCDC83Q8IWF9 413 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 KLHDC9Q8NEP7 349 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 CTCFLQ8NI51 663 aaPredicted RBP14.01□□□□□ -0.17
UPF3A-210ENST00000493727 ZNF576Q9H609 170 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 STARD7Q9NQZ5 370 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 TMEM39AQ9NV64 488 aa14.01□□□□□ -0.17
UPF3A-210ENST00000493727 ELP1O95163 1332 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 ASB14A6NK59 587 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 CPLX1O14810 134 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 PFKFB2O60825 505 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 LARGE1O95461 756 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 KIF5BP33176 963 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 NOVP48745 357 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 ACLYP53396 1101 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 RCAN1P53805 252 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 EVCP57679 992 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 NR1H3Q13133 447 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 CCDC96Q2M329 555 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 RASIP1Q5U651 963 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 CPLX2Q6PUV4 134 aaKnown RBP14□□□□□ -0.17
UPF3A-210ENST00000493727 NECAB1Q8N987 351 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 GTF3C6Q969F1 213 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 TIFAQ96CG3 184 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 GLT1D1Q96MS3 346 aa14□□□□□ -0.17
UPF3A-210ENST00000493727 BUD13Q9BRD0 619 aaKnown RBP eCLIP14□□□□□ -0.172e-8■■■■■ 40.2
UPF3A-210ENST00000493727 RNF146Q9NTX7 359 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms