RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 UIMC1Q96RL1 719 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 USP40Q9NVE5 1235 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 BARHL2Q9NY43 387 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 OGFRQ9NZT2 677 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 RSPH14Q9UHP6 348 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 GDAQ9Y2T3 454 aa7.87□□□□□ -1.15
HERC4-211ENST00000492996 CAND2O75155 1236 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 TXLNAP40222 546 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 PSEN1P49768 467 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 UBXN2AP68543 259 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 GABPB1Q06547 395 aaPredicted RBP7.86□□□□□ -1.15
HERC4-211ENST00000492996 TCP10Q12799 353 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 E2F4Q16254 413 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 HABP4Q5JVS0 413 aaKnown RBP7.86□□□□□ -1.15
HERC4-211ENST00000492996 RIOX2Q8IUF8 465 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 ELOA2Q8IYF1 753 aaPredicted RBP7.86□□□□□ -1.15
HERC4-211ENST00000492996 KIF18AQ8NI77 898 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 ZNF526Q8TF50 670 aaPredicted RBP7.86□□□□□ -1.15
HERC4-211ENST00000492996 GSDMAQ96QA5 445 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 SEC63Q9UGP8 760 aaKnown RBP7.86□□□□□ -1.15
HERC4-211ENST00000492996 TMX2Q9Y320 296 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 PAXBP1Q9Y5B6 917 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 PCDHAC2Q9Y5I4 1007 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 CCL15-CCL14A0A0B4J2E2 113 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 PPP1R3GB7ZBB8 358 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 CCNT1O60563 726 aaKnown RBP7.86□□□□□ -1.15
HERC4-211ENST00000492996 SNHG28P0DPA3 235 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 KIF22Q14807 665 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 CCL15Q16663 113 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 CCDC178Q5BJE1 867 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 PDXDC2PQ6P474 469 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 KIAA0825Q8IV33 1275 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 C4orf32Q8N8J7 132 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 RRP36Q96EU6 259 aaKnown RBP7.86□□□□□ -1.15
HERC4-211ENST00000492996 TMEM260Q9NX78 707 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 ZNF215Q9UL58 517 aaPredicted RBP7.86□□□□□ -1.15
HERC4-211ENST00000492996 NLRC5Q86WI3 1866 aa7.86□□□□□ -1.15
HERC4-211ENST00000492996 PES1O00541 588 aaKnown RBP7.85□□□□□ -1.15
HERC4-211ENST00000492996 WDR46O15213 610 aaKnown RBP7.85□□□□□ -1.15
HERC4-211ENST00000492996 ERCC5P28715 1186 aaPredicted RBP7.85□□□□□ -1.15
HERC4-211ENST00000492996 FXR1P51114 621 aaKnown RBP eCLIP7.85□□□□□ -1.15
HERC4-211ENST00000492996 RBM5P52756 815 aaKnown RBP eCLIP7.85□□□□□ -1.15
HERC4-211ENST00000492996 ZNF792Q3KQV3 632 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 SPATA1Q5VX52 437 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 SPECC1LQ69YQ0 1117 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 FEZ1Q99689 392 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 DESI2Q9BSY9 194 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 VPS16Q9H269 839 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 GEMIN8Q9NWZ8 242 aaKnown RBP7.85□□□□□ -1.15
HERC4-211ENST00000492996 DNAI1Q9UI46 699 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 SLC16A2P36021 539 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 NCBP1Q09161 790 aaKnown RBP7.85□□□□□ -1.15
HERC4-211ENST00000492996 NFIAQ12857 509 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 BAG1Q99933 345 aaPredicted RBP7.85□□□□□ -1.15
HERC4-211ENST00000492996 EFCC1Q9HA90 598 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 SH3GLB2Q9NR46 395 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 LMCD1Q9NZU5 365 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 TRIM49BA6NDI0 452 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 USP17L15C9J2P7 530 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 USP17L13C9JLJ4 530 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 USP17L11C9JVI0 530 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 USP17L18D6R9N7 530 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 USP17L22D6RA61 530 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 USP17L17D6RBQ6 530 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 USP17L19D6RCP7 530 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 USP17L20D6RJB6 530 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 RPN1P04843 607 aaKnown RBP7.85□□□□□ -1.15
HERC4-211ENST00000492996 LONP1P36776 959 aaKnown RBP7.85□□□□□ -1.15
HERC4-211ENST00000492996 CDK7P50613 346 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 USP17L24Q0WX57 530 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 SHROOM1Q2M3G4 852 aaPredicted RBP7.85□□□□□ -1.15
HERC4-211ENST00000492996 RPAINQ86UA6 219 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 ZFPM1Q8IX07 1006 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 TBCKQ8TEA7 893 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 R3HDMLQ9H3Y0 253 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 SH2D4AQ9H788 454 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 C6orf50Q9HD87 102 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 STXBP5LQ9Y2K9 1186 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 COL4A2P08572 1712 aa7.85□□□□□ -1.15
HERC4-211ENST00000492996 M0R2N6 131 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 PDHXO00330 501 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 GTPBP6O43824 516 aaPredicted RBP7.84□□□□□ -1.15
HERC4-211ENST00000492996 PARNO95453 639 aaKnown RBP7.84□□□□□ -1.15
HERC4-211ENST00000492996 PDHBP11177 359 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 SHMT1P34896 483 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 TECP42680 631 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 MTF1Q14872 753 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 NR1I3Q14994 352 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 NONOQ15233 471 aaKnown RBP eCLIP7.84□□□□□ -1.153e-7■■■■□ 23.9
HERC4-211ENST00000492996 ARL6IP4Q66PJ3 421 aaKnown RBP7.84□□□□□ -1.15
HERC4-211ENST00000492996 TTBK2Q6IQ55 1244 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 ZSCAN29Q8IWY8 852 aaPredicted RBP7.84□□□□□ -1.15
HERC4-211ENST00000492996 IGSF22Q8N9C0 903 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 TC2NQ8N9U0 490 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 SPZ1Q9BXG8 430 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 DISC1Q9NRI5 854 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 MTMR4Q9NYA4 1195 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 TAB2Q9NYJ8 693 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 N4BP3O15049 544 aa7.84□□□□□ -1.15
HERC4-211ENST00000492996 CTIFO43310 598 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms