RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 TNNT3P45378 269 aaPredicted RBP14.25□□□□□ -0.13
PRAME-213ENST00000492657 FKBP1AP62942 108 aaKnown RBP14.25□□□□□ -0.13
PRAME-213ENST00000492657 APBA1Q02410 837 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 CEP112Q8N8E3 955 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 NOA1Q8NC60 698 aaKnown RBP14.25□□□□□ -0.13
PRAME-213ENST00000492657 ACER1Q8TDN7 264 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 CRYGNQ8WXF5 182 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 SUGCTQ9HAC7 445 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 ARHGAP20Q9P2F6 1191 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 PCDHA2Q9Y5H9 948 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 MYH10P35580 1976 aa14.25□□□□□ -0.13
PRAME-213ENST00000492657 CYP3A7-CYP3A51PA0A087WV96 503 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 BMP3P12645 472 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 CYP3A7P24462 503 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 CYLC1P35663 651 aaPredicted RBP14.24□□□□□ -0.13
PRAME-213ENST00000492657 LRRC63Q05C16 580 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 PSMD2Q13200 908 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 SMC1AQ14683 1233 aaKnown RBP14.24□□□□□ -0.13
PRAME-213ENST00000492657 ZCWPW2Q504Y3 356 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 RBM26Q5T8P6 1007 aaKnown RBP14.24□□□□□ -0.13
PRAME-213ENST00000492657 FOXR1Q6PIV2 292 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 RRAGAQ7L523 313 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 CATSPER3Q86XQ3 398 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 ETNPPLQ8TBG4 499 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 LENG9Q96B70 501 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 LRRC27Q9C0I9 530 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 PDGFDQ9GZP0 370 aaPredicted RBP14.24□□□□□ -0.13
PRAME-213ENST00000492657 BMP2KQ9NSY1 1161 aaPredicted RBP14.24□□□□□ -0.13
PRAME-213ENST00000492657 MYO1AQ9UBC5 1043 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 MACROD2A1Z1Q3 448 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 SPIRE1Q08AE8 756 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.134e-75■□□□□ 10.5
PRAME-213ENST00000492657 SAMD1Q6SPF0 538 aaPredicted RBP14.24□□□□□ -0.13
PRAME-213ENST00000492657 MBOAT7Q96N66 472 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 TSG101Q99816 390 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 CRACR2AQ9BSW2 395 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 NT5C3AQ9H0P0 336 aa14.24□□□□□ -0.13
PRAME-213ENST00000492657 EIF3CLB5ME19 914 aaKnown RBP14.23□□□□□ -0.13
PRAME-213ENST00000492657 RAD17O75943 681 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 EIF4A3P38919 411 aaKnown RBP14.23□□□□□ -0.13
PRAME-213ENST00000492657 KRT83P78385 493 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 KCNMA1Q12791 1236 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 ZSCAN26Q16670 478 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 FIGNQ5HY92 759 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CDAN1Q8IWY9 1227 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 GMCL1P1Q8NEA9 526 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CCDC42Q96M95 316 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 EIF3CQ99613 913 aaKnown RBP14.23□□□□□ -0.13
PRAME-213ENST00000492657 ZNF646O15015 1829 aaPredicted RBP14.23□□□□□ -0.13
PRAME-213ENST00000492657 A0A1W2PQJ5 194 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 LRRC53A6NM62 1247 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 H3BQF6 201 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 ATP8B1O43520 1251 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 KRT18P05783 430 aaKnown RBP14.23□□□□□ -0.13
PRAME-213ENST00000492657 CASP5P51878 434 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CYP4A11Q02928 519 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CCDC40Q4G0X9 1142 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 SCFD1Q8WVM8 642 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CNKSR1Q969H4 720 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 GMCL1Q96IK5 515 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CAPZA3Q96KX2 299 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 GLT8D2Q9H1C3 349 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRAME-213ENST00000492657 PRR12Q9ULL5 1215 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 KDM3AQ9Y4C1 1321 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CTAGE15A4D2H0 777 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 PSMD14O00487 310 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CTAGE8P0CG41 777 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 SPATA31C1P0DKV0 1188 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 SLC12A3P55017 1021 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CC2D2BQ6DHV5 1058 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 TRAPPC11Q7Z392 1133 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CTAGE6Q86UF2 777 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CTAGE4Q8IX94 777 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 CCDC65Q8IXS2 484 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 FUT8Q9BYC5 575 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 NLRC4Q9NPP4 1024 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
PRAME-213ENST00000492657 PLAGL2Q9UPG8 496 aa14.23□□□□□ -0.13
PRAME-213ENST00000492657 SPDYE3A6NKU9 549 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 MSH4O15457 936 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 PHACTR2O75167 634 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
PRAME-213ENST00000492657 FGFR1OPO95684 399 aaKnown RBP14.22□□□□□ -0.13
PRAME-213ENST00000492657 HMGB2P26583 209 aaKnown RBP14.22□□□□□ -0.13
PRAME-213ENST00000492657 FKBP3Q00688 224 aaKnown RBP14.22□□□□□ -0.13
PRAME-213ENST00000492657 AP3B2Q13367 1082 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 WHAMMP3Q1A5X7 153 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 LONRF2Q1L5Z9 754 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 CCDC170Q8IYT3 715 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 BAP1Q92560 729 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 NAP1L4Q99733 375 aaKnown RBP14.22□□□□□ -0.13
PRAME-213ENST00000492657 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
PRAME-213ENST00000492657 COL4A3BPQ9Y5P4 624 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 N4BP1O75113 896 aaKnown RBP14.22□□□□□ -0.13
PRAME-213ENST00000492657 ENTPD3O75355 529 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 UBXN2AP68543 259 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 ZYXQ15942 572 aaKnown RBP14.22□□□□□ -0.13
PRAME-213ENST00000492657 SLFN12Q8IYM2 578 aa14.22□□□□□ -0.13
PRAME-213ENST00000492657 MMS19Q96T76 1030 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms