RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 LGR6Q9HBX8 967 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 PRDM5Q9NQX1 630 aaPredicted RBP3.88□□□□□ -1.79
SNX13-209ENST00000492626 CHST7Q9NS84 486 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 BACE2Q9Y5Z0 518 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 COMMD10Q9Y6G5 202 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 SPATA31A1Q5TZJ5 1347 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 TRPM7Q96QT4 1865 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 H3BM21 787 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 EIF3JO75822 258 aaKnown RBP3.88□□□□□ -1.79
SNX13-209ENST00000492626 NBPF7P0C2Y1 421 aaPredicted RBP3.88□□□□□ -1.79
SNX13-209ENST00000492626 ELNP15502 786 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 KPNA1P52294 538 aaPredicted RBP3.88□□□□□ -1.79
SNX13-209ENST00000492626 NRG1Q02297 640 aaPredicted RBP3.88□□□□□ -1.79
SNX13-209ENST00000492626 SCRN1Q12765 414 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 NFKBIBQ15653 356 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 TRIM61Q5EBN2 209 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 SLC7A14Q8TBB6 771 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 SCYL1Q96KG9 808 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 PHF20Q9BVI0 1012 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 NKX2-4Q9H2Z4 354 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 KCNF1Q9H3M0 494 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 LRRC4BQ9NT99 713 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 GPATCH2Q9NW75 528 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 ZIM2Q9NZV7 527 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 SUSD2Q9UGT4 822 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 MKL2Q9ULH7 1088 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 ACTL7BQ9Y614 415 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 KIAA0232Q92628 1395 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 SHISA8B8ZZ34 492 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 DLX3O60479 287 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 DNAJC8O75937 253 aaPredicted RBP3.87□□□□□ -1.79
SNX13-209ENST00000492626 CRTAMO95727 393 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 NEFMP07197 916 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 NMIQ13287 307 aaPredicted RBP3.87□□□□□ -1.79
SNX13-209ENST00000492626 IQCEQ6IPM2 695 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 GGT6Q6P531 493 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 CLUHP3Q96NS8 147 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 GPR101Q96P66 508 aaPredicted RBP3.87□□□□□ -1.79
SNX13-209ENST00000492626 TRIT1Q9H3H1 467 aaKnown RBP3.87□□□□□ -1.79
SNX13-209ENST00000492626 AKTIPQ9H8T0 292 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 ZNF180Q9UJW8 692 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 PCDHA9Q9Y5H5 950 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 CBX7O95931 251 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 NID1P14543 1247 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 LTBRP36941 435 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 GFRA1P56159 465 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 ZCCHC8Q6NZY4 707 aaKnown RBP3.87□□□□□ -1.79
SNX13-209ENST00000492626 TOP6BLQ8N6T0 577 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 UTP4Q969X6 686 aaKnown RBP3.87□□□□□ -1.79
SNX13-209ENST00000492626 DEAF1O75398 565 aaPredicted RBP3.87□□□□□ -1.79
SNX13-209ENST00000492626 DLGAP3O95886 979 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 PAK1Q13153 545 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 CYP27C1Q4G0S4 372 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 KIAA1211Q6ZU35 1233 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 KIF18BQ86Y91 864 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 SNX27Q96L92 541 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 LGR4Q9BXB1 951 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 PRDM14Q9GZV8 571 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 GPR39O43194 453 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 SCGB1D2O95969 90 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 KIR3DL1P43629 444 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 ZNF460Q14592 562 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 ZNF174Q15697 407 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 GFOD2Q3B7J2 385 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 ATP13A4Q4VNC1 1196 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 KSR2Q6VAB6 950 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 AMOTL1Q8IY63 956 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 MRGPRX3Q96LB0 322 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 FBXL18Q96ME1 805 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 YIPF4Q9BSR8 244 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 PLVAPQ9BX97 442 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 TRIM39Q9HCM9 518 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 TRAF6Q9Y4K3 522 aa3.87□□□□□ -1.79
SNX13-209ENST00000492626 FAM95CA0A1B0GW59 222 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 SHTN1A0MZ66 631 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 BLACEA4D250 179 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 FAM47E-STBD1D6RA91 191 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 STXBP3O00186 592 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 VAMP4O75379 141 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 SRGAP2CP0DJJ0 459 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 DNM2P50570 870 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 PCBP1Q15365 356 aaKnown RBP eCLIP3.86□□□□□ -1.79
SNX13-209ENST00000492626 CLUL1Q15846 466 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 PTPN21Q16825 1174 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 ARHGAP44Q17R89 818 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 RSPO2Q6UXX9 243 aaPredicted RBP3.86□□□□□ -1.79
SNX13-209ENST00000492626 SLC51AQ86UW1 340 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 SVOPQ8N4V2 548 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 C2orf69Q8N8R5 385 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 TMEM145Q8NBT3 493 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 DIO2Q92813 273 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 MPHOSPH6Q99547 160 aaKnown RBP3.86□□□□□ -1.79
SNX13-209ENST00000492626 TOMM22Q9NS69 142 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 CATSPERZQ9NTU4 200 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 FAM105AQ9NUU6 356 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 LAMB4A4D0S4 1761 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 TCRBV16S1A1N1A0A5B0 115 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 C2orf71A6NGG8 1288 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 GNB5O14775 395 aa3.86□□□□□ -1.79
SNX13-209ENST00000492626 HIP1RO75146 1068 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms