RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 CHFRQ96EP1 664 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 EXOC2Q96KP1 924 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 AKT3Q9Y243 479 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 RWDD3Q9Y3V2 267 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 PTCH2Q9Y6C5 1203 aa4.37□□□□□ -1.71
HMGB1P30-201ENST00000492455 ESYT3A0FGR9 886 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 NPIPB8E9PQR5 432 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 ARNTLO00327 626 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 ENPP3O14638 875 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 B4GALT3O60512 393 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 KCNH1O95259 989 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 NAT2P11245 290 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 GRB10Q13322 594 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 WWC2Q6AWC2 1192 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 GTF2IRD2BQ6EKJ0 949 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 DENND5AQ6IQ26 1287 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 SDE2Q6IQ49 451 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 CD300LDQ6UXZ3 194 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 GTF2IRD2Q86UP8 949 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 DNERQ8NFT8 737 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 THAP3Q8WTV1 239 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 OSBP2Q969R2 916 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 C1orf159Q96HA4 380 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 ZDHHC15Q96MV8 337 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 FCRL3Q96P31 734 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 TMEM260Q9NX78 707 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 DIS3Q9Y2L1 958 aaKnown RBP4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 SUGT1Q9Y2Z0 365 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 TESMINQ9Y4I5 508 aa4.36□□□□□ -1.71
HMGB1P30-201ENST00000492455 GPR42O15529 346 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 IFNGR1P15260 489 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 GFRA1P56159 465 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 PPP2CBP62714 309 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 PPP2CAP67775 309 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 TKFCQ3LXA3 575 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 FAM209AQ5JX71 171 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 EEF1DP3Q658K8 133 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 DCP2Q8IU60 420 aaKnown RBP4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 LRRC47Q8N1G4 583 aaKnown RBP4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 KREMEN2Q8NCW0 462 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 CEP89Q96ST8 783 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 AP5M1Q9H0R1 490 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 NKX2-4Q9H2Z4 354 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 L2HGDHQ9H9P8 463 aa4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 TMA7Q9Y2S6 64 aaKnown RBP4.35□□□□□ -1.71
HMGB1P30-201ENST00000492455 IQCA1LA6NCM1 817 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 STXBP3O00186 592 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 AURKAO14965 403 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 DLX3O60479 287 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 ZNF623O75123 536 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 SCG5P05408 212 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 C6orf222P0C671 652 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 FGFR1P11362 822 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 EPHB4P54760 987 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 HSP90AA2PQ14568 343 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 NTRK3Q16288 839 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 LONRF2Q1L5Z9 754 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 PRSS53Q2L4Q9 553 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 DPY19L1Q2PZI1 675 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 SLC35F1Q5T1Q4 408 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 EGFLAMQ63HQ2 1017 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 SLFN13Q68D06 897 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 COPS5Q92905 334 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 PPP1R14AQ96A00 147 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 AARSD1Q9BTE6 412 aaKnown RBP4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 IER2Q9BTL4 223 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 TMEM168Q9H0V1 697 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 CSRNP2Q9H175 543 aa4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 NGRNQ9NPE2 291 aaKnown RBP4.34□□□□□ -1.71
HMGB1P30-201ENST00000492455 SHROOM4Q9ULL8 1493 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 TRAV20A0A0B4J274 112 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 PATE3B3GLJ2 98 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 NOP56O00567 594 aaKnown RBP4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 ZNF202O95125 648 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 PABPC1P11940 636 aaKnown RBP4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 MCM7P33993 719 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 AMPD2Q01433 879 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 FOXE3Q13461 319 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 R3HDM1Q15032 1099 aaKnown RBP4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 RCSD1Q6JBY9 416 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 POMZP3Q6PJE2 187 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 ZNF662Q6ZS27 426 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 KIAA0907Q7Z7F0 614 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 FAM177A1Q8N128 213 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 TMEM145Q8NBT3 493 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 NPLOC4Q8TAT6 608 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 FRS2Q8WU20 508 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 CYP26B1Q9NR63 512 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 FANCLQ9NW38 375 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 LRP2BPQ9P2M1 347 aa4.33□□□□□ -1.72
HMGB1P30-201ENST00000492455 AGRPO00253 132 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 PPP1R12AO14974 1030 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 PRODHO43272 600 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 CYP7B1O75881 506 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 THBDP07204 575 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 ITGA1P56199 1179 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 NANOS3P60323 173 aaKnown RBP4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 SCRN1Q12765 414 aa4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 PRKD1Q15139 912 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P30-201ENST00000492455 PLEKHG4Q58EX7 1191 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms