RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ZNF511Q8NB15 262 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 SYTL5Q8TDW5 730 aaPredicted RBP8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 VWCEQ96DN2 955 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 WDR11Q9BZH6 1224 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 LSG1Q9H089 658 aaKnown RBP8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 TMEM39AQ9NV64 488 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 PRKAG2Q9UGJ0 569 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 RBM8AQ9Y5S9 174 aaKnown RBP8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 UMODL1Q5DID0 1318 aa8.54□□□□□ -1.04
PRPF4B-208ENST00000490653 RBM47A0AV96 593 aaKnown RBP8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 PALM3A6NDB9 673 aaPredicted RBP8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 MOXD2PA6NHM9 499 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 GRXCR1A8MXD5 290 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 KLRF2D3W0D1 207 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 OPLAHO14841 1288 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 IFIT3O14879 490 aaKnown RBP8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 CYTH3O43739 400 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 PARP1P09874 1014 aaKnown RBP8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 ACRP10323 421 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 CCDC178Q5BJE1 867 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 DESI1Q6ICB0 168 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 ANKRD33Q7Z3H0 272 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 TLK2Q86UE8 772 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 RAB11FIP4Q86YS3 637 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 MB21D2Q8IYB1 491 aaPredicted RBP8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 IGDCC4Q8TDY8 1250 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 NUP133Q8WUM0 1156 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 RUFY2Q8WXA3 655 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 PIBF1Q8WXW3 757 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 GLT1D1Q96MS3 346 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 UBAC1Q9BSL1 405 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 PPP1R12CQ9BZL4 782 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 AP5M1Q9H0R1 490 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 TRPV6Q9H1D0 765 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 WDR19Q8NEZ3 1342 aa8.53□□□□□ -1.04
PRPF4B-208ENST00000490653 SLC27A2O14975 620 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 DHX16O60231 1041 aaKnown RBP8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 CD4P01730 458 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 FOSL2P15408 326 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 RAG1P15918 1043 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 NDUFV2P19404 249 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 EDNRBP24530 442 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 SSTR3P32745 418 aaPredicted RBP8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 CYP2C18P33260 490 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 NNTQ13423 1086 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 GRM4Q14833 912 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 FSCN1Q16658 493 aaKnown RBP8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 LY6KQ17RY6 165 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 DUSP28Q4G0W2 176 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 ASPRV1Q53RT3 343 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 RASIP1Q5U651 963 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 SEPT14Q6ZU15 432 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 FBXO11Q86XK2 927 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 FAM126BQ8IXS8 530 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 SLC43A3Q8NBI5 491 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 PCSK9Q8NBP7 692 aaKnown RBP8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 PRR7Q8TB68 274 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 MTMR8Q96EF0 704 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 TOX2Q96NM4 488 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 PIGSQ96S52 555 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 ESYT1Q9BSJ8 1104 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 MYL10Q9BUA6 226 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 LRRC2Q9BYS8 371 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 BCAS3Q9H6U6 928 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 CNNM2Q9H8M5 875 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 SPC25Q9HBM1 224 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 VTA1Q9NP79 307 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 ADD3Q9UEY8 706 aaKnown RBP8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 TBX21Q9UL17 535 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 ELP1O95163 1332 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 RAD50Q92878 1312 aa8.52□□□□□ -1.05
PRPF4B-208ENST00000490653 LRRC37A2A6NM11 1700 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 MYH6P13533 1939 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 A0A0U1RQG5 324 aaPredicted RBP8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 DCDC2CA8MYV0 355 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 SORBS3O60504 671 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 B4GALT4O60513 344 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 CFBP00751 764 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 TIMP1P01033 207 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 MYL3P08590 195 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 TIMP2P16035 220 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 EIF2AK2P19525 551 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 RXRAP19793 462 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 HOXA13P31271 388 aaPredicted RBP8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 PDE4DQ08499 809 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 TROAPQ12815 778 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 ITGA7Q13683 1181 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 WTAPQ15007 396 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 NECTIN1Q15223 517 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 TMEM67Q5HYA8 995 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 MRPL14Q6P1L8 145 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 CCDC62Q6P9F0 684 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 HOMER1Q86YM7 354 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 CMTR1Q8N1G2 835 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 RGS22Q8NE09 1264 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 OR6J1Q8NGC5 347 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 NCOA7Q8NI08 942 aa8.51□□□□□ -1.05
PRPF4B-208ENST00000490653 GPKOWQ92917 476 aaPredicted RBP eCLIP8.51□□□□□ -1.053e-19■■□□□ 12.2
PRPF4B-208ENST00000490653 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.51□□□□□ -1.058e-10■□□□□ 9.6
PRPF4B-208ENST00000490653 RIOX1Q9H6W3 641 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms