RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 PCDHA2Q9Y5H9 948 aa8.22□□□□□ -1.09
TM9SF3-206ENST00000490192 ANO9A1A5B4 782 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 FAM47E-STBD1D6RA91 191 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 KRT37O76014 449 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 PHKG2P15735 406 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 VCAM1P19320 739 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 SPINK2P20155 84 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 HTRA3P83110 453 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 CLEC16AQ2KHT3 1053 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 RCSD1Q6JBY9 416 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 MORC1Q86VD1 984 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 SCYL1Q96KG9 808 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 COX4I2Q96KJ9 171 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 STRBPQ96SI9 672 aaKnown RBP8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 SLC12A9Q9BXP2 914 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 MAF1Q9H063 256 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 PPCSQ9HAB8 311 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 PTPRHQ9HD43 1115 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 MAN1C1Q9NR34 630 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 GNL3LQ9NVN8 582 aaKnown RBP8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 GPATCH2Q9NW75 528 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 CBLCQ9ULV8 474 aa8.21□□□□□ -1.1
TM9SF3-206ENST00000490192 H2AFYO75367 372 aaKnown RBP8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 GRK2P25098 689 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 HOXA10P31260 410 aaPredicted RBP8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 ADMP35318 185 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 GRK3P35626 688 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 RBM10P98175 930 aaKnown RBP8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 GALEQ14376 348 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 INF2Q27J81 1249 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 SFRP5Q5T4F7 317 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 GPR158Q5T848 1215 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 EFCAB2Q5VUJ9 269 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 EEF1DP3Q658K8 133 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 OTOP1Q7RTM1 612 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 AMOTL1Q8IY63 956 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 DAGLBQ8NCG7 672 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 TTC17Q96AE7 1141 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 TOPORSQ9NS56 1045 aaPredicted RBP8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 CATSPERZQ9NTU4 200 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 INVSQ9Y283 1065 aa8.2□□□□□ -1.1
TM9SF3-206ENST00000490192 KLHL33A6NCF5 533 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 TRIM75PA6NK02 468 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 FAM170BA6NMN3 283 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 GOLGA8AA7E2F4 631 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 GOLGA8BA8MQT2 603 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 H7C1D1 291 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 WDHD1O75717 1129 aaPredicted RBP8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 VAV1P15498 845 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 HSPA6P17066 643 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 PAMP19021 973 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 BMP8BP34820 402 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 HTR3AP46098 478 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 TERF2Q15554 542 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 CLUL1Q15846 466 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 CRY1Q16526 586 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 SEZ6L2Q6UXD5 910 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 RASSF3Q86WH2 238 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 ZNF655Q8N720 491 aaPredicted RBP8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 ENOX1Q8TC92 643 aaKnown RBP8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 PANK1Q8TE04 598 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 PNISRQ8TF01 805 aaKnown RBP8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 RUNDC1Q96C34 613 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 MMP19Q99542 508 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 ELAC2Q9BQ52 826 aaKnown RBP8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 DUSP23Q9BVJ7 150 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 SLC12A5Q9H2X9 1139 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 NMRK2Q9NPI5 230 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 PRDM5Q9NQX1 630 aaPredicted RBP8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 PUF60Q9UHX1 559 aaKnown RBP8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 PNMA2Q9UL42 364 aa8.19□□□□□ -1.1
TM9SF3-206ENST00000490192 NPHP3-ACAD11A0A0J9YXS1 232 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 NRDCO43847 1150 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 LEFTY1O75610 366 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 ZRANB2O95218 330 aaKnown RBP eCLIP8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 GSTM1P09488 218 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 SLC9A1P19634 815 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 SERPINB3P29508 390 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 KIR3DL1P43629 444 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 ACAP2Q15057 778 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 CYP27C1Q4G0S4 372 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 IFIT1BQ5T764 474 aaKnown RBP8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 MBLAC2Q68D91 279 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 PPM1EQ8WY54 764 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 TCTN2Q96GX1 697 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 TEKT5Q96M29 485 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 KCNJ15Q99712 375 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 BOCQ9BWV1 1114 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 MS4A5Q9H3V2 200 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 LRRC4CQ9HCJ2 640 aa8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 DDX21Q9NR30 783 aaKnown RBP eCLIP8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 NOC2LQ9Y3T9 749 aaKnown RBP8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 OAS3Q9Y6K5 1087 aaKnown RBP8.18□□□□□ -1.1
TM9SF3-206ENST00000490192 RASSF10A6NK89 507 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 HMGB1P1B2RPK0 211 aaPredicted RBP8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 AP1G1O43747 822 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 GPR3P46089 330 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 LACTBP83111 547 aaPredicted RBP8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 INO80DQ53TQ3 878 aaPredicted RBP8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 RRP12Q5JTH9 1297 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms