RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 A0A087WUV0 522 aaPredicted RBP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 PYGBP11216 843 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 ADD2P35612 726 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 BAG6P46379 1132 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 APOA5Q6Q788 366 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 TRMT44Q8IYL2 757 aaKnown RBP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 NEK9Q8TD19 979 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 SNX25Q9H3E2 840 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 HDAC11Q96DB2 347 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 LGR6Q9HBX8 967 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 LRRIQ4A6NIV6 560 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 GSPT1P15170 499 aaKnown RBP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 JAK3P52333 1124 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 MGARPQ8TDB4 240 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 MRRFQ96E11 262 aaKnown RBP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 CENPKQ9BS16 269 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 DISC1Q9NRI5 854 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 PI4KBQ9UBF8 816 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 PNMA3Q9UL41 463 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 FDX1P10109 184 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 NBPF10Q6P3W6 841 aaKnown RBP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 DNAJC10Q8IXB1 793 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 SARM1Q6SZW1 724 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 NME8Q8N427 588 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.56□□□□□ -0.883e-6■■■■■ 50.8
LSAMP-205ENST00000490035 PSMB7Q99436 277 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 SCOCQ9UIL1 159 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 GINS2Q9Y248 185 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 ARAP3Q8WWN8 1544 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 TCP10Q12799 353 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 TEX12Q9BXU0 123 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 HNRNPCL1O60812 293 aaKnown RBP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 OTUD7AQ8TE49 926 aaPredicted RBP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 EAF2Q96CJ1 260 aaPredicted RBP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 TRIM4Q9C037 500 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 KMT5AQ9NQR1 393 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 SERPINB13Q9UIV8 391 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 SETBP1Q9Y6X0 1596 aa9.56□□□□□ -0.88
LSAMP-205ENST00000490035 TARBP1Q13395 1621 aaKnown RBP9.56□□□□□ -0.88
LSAMP-205ENST00000490035 NCKAP5LQ9HCH0 1330 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 ABI1Q8IZP0 508 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 GIPC2Q8TF65 315 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 RBM41Q96IZ5 413 aaKnown RBP9.55□□□□□ -0.88
LSAMP-205ENST00000490035 CYP26B1Q9NR63 512 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 BTDP43251 543 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 TAP1Q03518 808 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 ENOSF1Q7L5Y1 443 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 GCNT4Q9P109 453 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 BTBD18B2RXH4 712 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 GOLGA8MH3BSY2 632 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 DLATP10515 647 aaKnown RBP9.55□□□□□ -0.88
LSAMP-205ENST00000490035 PHEXP78562 749 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 CHRNDQ07001 517 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 KCTD2Q14681 263 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 GDAP1L1Q96MZ0 367 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 ZNF212Q9UDV6 495 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 ANXA13P27216 316 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 COPB2P35606 906 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 ARHGDIAP52565 204 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 DNAJC24Q6P3W2 148 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 TRIM72Q6ZMU5 477 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 GNAT1P11488 350 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 CCNE1P24864 410 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 RASSF7Q02833 373 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 FSCBQ5H9T9 825 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 PDIK1LQ8N165 341 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 MAGEB5Q9BZ81 275 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 AP5M1Q9H0R1 490 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 PSAPP07602 524 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 SLFNL1Q499Z3 407 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 FAM47AQ5JRC9 791 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 RASIP1Q5U651 963 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
LSAMP-205ENST00000490035 CLEC4GQ6UXB4 293 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 KCTD17Q8N5Z5 321 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 NUDCD1Q96RS6 583 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 SPATS2LQ9NUQ6 558 aaKnown RBP9.55□□□□□ -0.88
LSAMP-205ENST00000490035 FAF1Q9UNN5 650 aaPredicted RBP9.55□□□□□ -0.88
LSAMP-205ENST00000490035 TMEM247A6NEH6 219 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 CLTAP09496 248 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 TAC1P20366 129 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 GCKP35557 465 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 EHHADHQ08426 723 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 ZNF653Q96CK0 615 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 SLC39A2Q9NP94 309 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 ALAS1P13196 640 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 YWHAGP61981 247 aaKnown RBP eCLIP9.55□□□□□ -0.88
LSAMP-205ENST00000490035 HOMEZQ8IX15 550 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 RDH13Q8NBN7 331 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 VPS39Q96JC1 886 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 MYL10Q9BUA6 226 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 SEPT9Q9UHD8 586 aaPredicted RBP9.55□□□□□ -0.88
LSAMP-205ENST00000490035 MAD1L1Q9Y6D9 718 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 USP6P35125 1406 aa9.55□□□□□ -0.88
LSAMP-205ENST00000490035 PNMA6FA0A0J9YX94 578 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 TNFAIP2Q03169 654 aa9.54□□□□□ -0.88
LSAMP-205ENST00000490035 THOC5Q13769 683 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms