RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 SMARCC2Q8TAQ2 1214 aa10.99□□□□□ -0.65
CCT3-213ENST00000489870 ASB2Q96Q27 587 aa10.99□□□□□ -0.65
CCT3-213ENST00000489870 NKX2-4Q9H2Z4 354 aa10.99□□□□□ -0.65
CCT3-213ENST00000489870 PSTPIP2Q9H939 334 aa10.99□□□□□ -0.65
CCT3-213ENST00000489870 EHMT1Q9H9B1 1298 aa10.99□□□□□ -0.65
CCT3-213ENST00000489870 THEGQ9P2T0 379 aa10.99□□□□□ -0.65
CCT3-213ENST00000489870 ZNF215Q9UL58 517 aaPredicted RBP10.99□□□□□ -0.65
CCT3-213ENST00000489870 YBX2Q9Y2T7 364 aaKnown RBP10.99□□□□□ -0.65
CCT3-213ENST00000489870 VCANP13611 3396 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 GBF1Q92538 1859 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 TANC1Q9C0D5 1861 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 SCN5AQ14524 2016 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 NOP56O00567 594 aaKnown RBP10.98□□□□□ -0.65
CCT3-213ENST00000489870 MEIS2O14770 477 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 PRC1O43663 620 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 UBA1P22314 1058 aaKnown RBP10.98□□□□□ -0.65
CCT3-213ENST00000489870 PTGS1P23219 599 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 HOXA13P31271 388 aaPredicted RBP10.98□□□□□ -0.65
CCT3-213ENST00000489870 ANTXR2P58335 489 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 MRPS9P82933 396 aaKnown RBP10.98□□□□□ -0.65
CCT3-213ENST00000489870 KRT32Q14532 448 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 SLC35G1Q2M3R5 365 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 TRIM71Q2Q1W2 868 aaKnown RBP10.98□□□□□ -0.65
CCT3-213ENST00000489870 FANCBQ8NB91 859 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 APBB2Q92870 758 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 SAMD11Q96NU1 681 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 ESYT1Q9BSJ8 1104 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 LSG1Q9H089 658 aaKnown RBP10.98□□□□□ -0.65
CCT3-213ENST00000489870 RBM28Q9NW13 759 aaKnown RBP10.98□□□□□ -0.65
CCT3-213ENST00000489870 INSL6Q9Y581 213 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 SLC12A7Q9Y666 1083 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 SQORQ9Y6N5 450 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 NRCAMQ92823 1304 aa10.98□□□□□ -0.65
CCT3-213ENST00000489870 C17orf102A2RUQ5 167 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 RSPH10B2B2RC85 870 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 SH2B2O14492 632 aaPredicted RBP10.97□□□□□ -0.65
CCT3-213ENST00000489870 EPB41L2O43491 1005 aaKnown RBP10.97□□□□□ -0.65
CCT3-213ENST00000489870 TLL1O43897 1013 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 LGR5O75473 907 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 GJB5O95377 273 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 RSPH10BP0C881 870 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 WDR5P61964 334 aaKnown RBP10.97□□□□□ -0.65
CCT3-213ENST00000489870 SP2Q02086 613 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 TAP1Q03518 808 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 ADGRE1Q14246 886 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 GPNMBQ14956 572 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 FAM26DQ5JW98 314 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 TAF2Q6P1X5 1199 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 NFXL1Q6ZNB6 911 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 CENPQQ7L2Z9 268 aaPredicted RBP10.97□□□□□ -0.65
CCT3-213ENST00000489870 FCHSD1Q86WN1 690 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 DHX38Q92620 1227 aaKnown RBP10.97□□□□□ -0.65
CCT3-213ENST00000489870 ATP6V0A1Q93050 837 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 ZBED2Q9BTP6 218 aa10.97□□□□□ -0.65
CCT3-213ENST00000489870 CCDC196A0A1B0GTZ2 297 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 SLC27A2O14975 620 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 NBNO60934 754 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 LGALS2P05162 132 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 CA3P07451 260 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 IGFBP4P22692 258 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 ERVK-21P61565 698 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 ADAM17P78536 824 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 PLEKHG4Q58EX7 1191 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 ZNF618Q5T7W0 954 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 CREB3L3Q68CJ9 461 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 PPP1R18Q6NYC8 613 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 DHX32Q7L7V1 743 aaKnown RBP10.96□□□□□ -0.65
CCT3-213ENST00000489870 RSPH3Q86UC2 560 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 FBXL16Q8N461 479 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 IL27Q8NEV9 243 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 SEPT1Q8WYJ6 367 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 GPR20Q99678 358 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 ALG1Q9BT22 464 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 RNPEPQ9H4A4 650 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 MTCH2Q9Y6C9 303 aa10.96□□□□□ -0.65
CCT3-213ENST00000489870 RRN3P2A6NIE6 340 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 SPDYE3A6NKU9 549 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 TNFRSF10AO00220 468 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 AMHP03971 560 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 SLC26A2P50443 739 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 RABGGTBP53611 331 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 HTRA4P83105 476 aaPredicted RBP10.95□□□□□ -0.66
CCT3-213ENST00000489870 EXOSC10Q01780 885 aaKnown RBP10.95□□□□□ -0.66
CCT3-213ENST00000489870 TRAF7Q6Q0C0 670 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 CYFIP1Q7L576 1253 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 SRBD1Q8N5C6 995 aaKnown RBP10.95□□□□□ -0.66
CCT3-213ENST00000489870 USP38Q8NB14 1042 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 SEPT8Q92599 483 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 NEK1Q96PY6 1258 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 TGS1Q96RS0 853 aaKnown RBP10.95□□□□□ -0.66
CCT3-213ENST00000489870 SMARCAD1Q9H4L7 1026 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 SENP2Q9HC62 589 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 PRDM6Q9NQX0 595 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 ERAP1Q9NZ08 941 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 BRWD1Q9NSI6 2320 aa10.95□□□□□ -0.66
CCT3-213ENST00000489870 SMIM10L2AP0DMW4 78 aa10.94□□□□□ -0.66
CCT3-213ENST00000489870 SMIM10L2BP0DMW5 78 aa10.94□□□□□ -0.66
CCT3-213ENST00000489870 CHMP4BP1P59074 171 aa10.94□□□□□ -0.66
CCT3-213ENST00000489870 USP17L6PQ6QN14 398 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms